RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 REC8O95072 547 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IL2RAP01589 272 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CYP21A2P08686 494 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CETPP11597 493 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 GUCY1A2P33402 732 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 BACE1P56817 501 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 INHBEP58166 350 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PSMA6P60900 246 aaKnown RBP6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TRDNQ13061 729 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SNAPC2Q13487 334 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CCL15Q16663 113 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 OTUD7BQ6GQQ9 843 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 GADL1Q6ZQY3 521 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FASTKD5Q7L8L6 764 aaKnown RBP6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NEDD1Q8NHV4 660 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 STAG1Q8WVM7 1258 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ESR2Q92731 530 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CITED4Q96RK1 184 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 WDR18Q9BV38 432 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KRT23Q9C075 422 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KANSL2Q9H9L4 492 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TMOD4Q9NZQ9 345 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TACC3Q9Y6A5 838 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MYH1P12882 1939 aa6.83□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZMYM6O95789 1325 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 BAZ2AQ9UIF9 1905 aaKnown RBP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 B4E1Z4 1266 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 C19orf81C9J6K1 198 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SLC27A2O14975 620 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TREHO43280 583 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ORC4O43929 436 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FZD6O60353 706 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TRPA1O75762 1119 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FGRP09769 529 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PCP11498 1178 aaKnown RBP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EEF2P13639 858 aaKnown RBP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TM4SF4P48230 202 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HMGCS2P54868 508 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MAP2K1Q02750 393 aaPredicted RBP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ICA1Q05084 483 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NECTIN1Q15223 517 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZYXQ15942 572 aaKnown RBP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CLEC10AQ8IUN9 316 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TBC1D10CQ8IV04 446 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ACER1Q8TDN7 264 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 BRI3BPQ8WY22 251 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CEP95Q96GE4 821 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MRGPRX2Q96LB1 330 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZKSCAN3Q9BRR0 538 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CLIP2Q9UDT6 1046 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 LRFN2Q9ULH4 789 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 STX8Q9UNK0 236 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KCNH4Q9UQ05 1017 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
SCARNA6.1-201ENST00000516989 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 A0A1W2PRG0 241 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 BTBD19C9JJ37 291 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 E7EWF7 191 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 WNT7AO00755 349 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZBTB39O15060 712 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NMT2O60551 498 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EIF5BO60841 1220 aaKnown RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TTLL1O95922 423 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZKSCAN1P17029 563 aaPredicted RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MCCP23508 829 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 USP14P54578 494 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 DGKZQ13574 1117 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TLR1Q15399 786 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TSNAXIP1Q2TAA8 658 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 RALYLQ86SE5 291 aaKnown RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IQCA1Q86XH1 822 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SIAH1Q8IUQ4 282 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NCOA7Q8NI08 942 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 EMID1Q96A84 441 aaPredicted RBP6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CHMP4CQ96CF2 233 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PTPN18Q99952 460 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SH2D4AQ9H788 454 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IL17RBQ9NRM6 502 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 RNF186Q9NXI6 227 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 MTMR4Q9NYA4 1195 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ZSWIM5Q9P217 1185 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 HRH3Q9Y5N1 445 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 CDK5RAP2Q96SN8 1893 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ROBO3Q96MS0 1386 aa6.81□□□□□ -1.32
SCARNA6.1-201ENST00000516989 NEDD4P46934 1319 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SERTM1A2A2V5 107 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PDHXO00330 501 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 IGF2BP3O00425 579 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TBC1D8O95759 1140 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 RECKO95980 971 aa6.8□□□□□ -1.32
SCARNA6.1-201ENST00000516989 ALDH1A1P00352 501 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms