RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 CCDC144CPQ8IYA2 1237 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 FBXL18Q96ME1 805 aa6.94□□□□□ -1.3
KDM3B-205ENST00000508386 TRMT13Q9NUP7 481 aaKnown RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
KDM3B-205ENST00000508386 VPS13AQ96RL7 3174 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ZBBXA8MT70 800 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 TLR3O15455 904 aaKnown RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 SURF6O75683 361 aaKnown RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 TRIM27P14373 513 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 IL9P15248 144 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 SMPD1P17405 629 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 SNRNP48Q6IEG0 339 aaKnown RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 TAPT1Q6NXT6 567 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 DEFB128Q7Z7B8 93 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 GJD3Q8N144 294 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 FAM133AQ8N9E0 248 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ARHGAP45Q92619 1136 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 TEX13BQ9BXU2 312 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ALDH8A1Q9H2A2 487 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ABHD16BQ9H3Z7 469 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 C1orf115Q9H7X2 142 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ARMT1Q9H993 441 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ARHGEF10LQ9HCE6 1279 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 RAVER2Q9HCJ3 691 aaKnown RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 RIF1Q5UIP0 2472 aaKnown RBP6.93□□□□□ -1.3
KDM3B-205ENST00000508386 ZNF532Q9HCE3 1301 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 PTPRSQ13332 1948 aa6.93□□□□□ -1.3
KDM3B-205ENST00000508386 TECTAO75443 2155 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 NAV1Q8NEY1 1877 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 BAZ2AQ9UIF9 1905 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 ATP2A1O14983 1001 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 DYNC1LI2O43237 492 aaPredicted RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 NDUFB10O96000 172 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SLC4A3P48751 1232 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 TNFAIP2Q03169 654 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 FSCN1Q16658 493 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SLC9C2Q5TAH2 1124 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 C16orf86Q6ZW13 317 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 HERC6Q8IVU3 1022 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 CPXCR1Q8N123 301 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 GDPD5Q8WTR4 605 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 PURBQ96QR8 312 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 CTAGE1Q96RT6 745 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 CRNKL1Q9BZJ0 848 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 MTIF3Q9H2K0 278 aaKnown RBP6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SLC38A10Q9HBR0 1119 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 SWAP70Q9UH65 585 aa6.92□□□□□ -1.3
KDM3B-205ENST00000508386 USP17L12C9JPN9 530 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 USP17L21D6R901 530 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 F5H6K3 240 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 COPB2P35606 906 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 KLRC3Q07444 240 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 LEXMQ3ZCV2 418 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 TLK2Q86UE8 772 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 CERS3Q8IU89 383 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 TMEM57Q8N5G2 664 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 RNF166Q96A37 237 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-205ENST00000508386 CLUAP1Q96AJ1 413 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 CCDC17Q96LX7 622 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 UIMC1Q96RL1 719 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 UBE2ZQ9H832 354 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-205ENST00000508386 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 SPC25Q9HBM1 224 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 ZNF536O15090 1300 aa6.91□□□□□ -1.3
KDM3B-205ENST00000508386 COL4A4P53420 1690 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 GREB1LQ9C091 1923 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 IGKV6D-41A0A0C4DH26 115 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 RAD21O60216 631 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 CABYRO75952 493 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 MBD4O95243 580 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 IQCF3P0C7M6 154 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 DEFB103AP81534 67 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 LSM11P83369 360 aaKnown RBP eCLIP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 OS9Q13438 667 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 ANKRD35Q8N283 1001 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 PRPF38AQ8NAV1 312 aaKnown RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 PHOSPHO2Q8TCD6 241 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 ADAM33Q9BZ11 813 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 SH2D4AQ9H788 454 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 ALG13Q9NP73 1137 aaKnown RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 A1CFQ9NQ94 594 aaKnown RBP6.9□□□□□ -1.3
KDM3B-205ENST00000508386 TNKSO95271 1327 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 ZBED9Q6R2W3 1325 aa6.9□□□□□ -1.3
KDM3B-205ENST00000508386 TRIP12Q14669 1992 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 GOLIM4O00461 696 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 MAP3K7O43318 606 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 ANP32CO43423 234 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 CT47B1P0C2W7 299 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms