RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 FBXO40Q9UH90 709 aa23.38■■□□□ 1.33
CDC42SE2-206ENST00000503291 PCDHA6Q9UN73 950 aa23.38■■□□□ 1.33
CDC42SE2-206ENST00000503291 PCDHA8Q9Y5H6 950 aa23.38■■□□□ 1.33
CDC42SE2-206ENST00000503291 F13A1P00488 732 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 CLK2P49760 499 aaKnown RBP23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 JAKMIP3Q5VZ66 844 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 SHCBP1Q8NEM2 672 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 MROH8Q9H579 483 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 EFCC1Q9HA90 598 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 TMEM260Q9NX78 707 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 RNF186Q9NXI6 227 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 TRPA1O75762 1119 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 NSMFQ6X4W1 530 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 TNFRSF25Q93038 417 aa23.37■■□□□ 1.33
CDC42SE2-206ENST00000503291 TBC1D8O95759 1140 aa23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 HSD17B4P51659 736 aa23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 RPS6P62753 249 aaKnown RBP23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 RESTQ13127 1097 aa23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 RNF207Q6ZRF8 634 aa23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 TEX2Q8IWB9 1127 aa23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 CCAR1Q8IX12 1150 aaKnown RBP23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 ZSCAN16Q9H4T2 348 aaPredicted RBP23.36■■□□□ 1.33
CDC42SE2-206ENST00000503291 GHRHRQ02643 423 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 WDR78Q5VTH9 848 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 SAMD3Q8N6K7 520 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 A1CFQ9NQ94 594 aaKnown RBP23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 MAP3K20Q9NYL2 800 aaKnown RBP23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 THSD7BQ9C0I4 1608 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 CEP350Q5VT06 3117 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 BAATQ14032 418 aaPredicted RBP23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 EARS2Q5JPH6 523 aaKnown RBP23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 ANKRD35Q8N283 1001 aa23.35■■□□□ 1.33
CDC42SE2-206ENST00000503291 FCHSD1Q86WN1 690 aa23.34■■□□□ 1.33
CDC42SE2-206ENST00000503291 CFHR5Q9BXR6 569 aa23.34■■□□□ 1.33
CDC42SE2-206ENST00000503291 CYP39A1Q9NYL5 469 aa23.34■■□□□ 1.33
CDC42SE2-206ENST00000503291 SLC30A10Q6XR72 485 aa23.33■■□□□ 1.33
CDC42SE2-206ENST00000503291 PIK3AP1Q6ZUJ8 805 aa23.33■■□□□ 1.33
CDC42SE2-206ENST00000503291 SYTL5Q8TDW5 730 aaPredicted RBP23.33■■□□□ 1.33
CDC42SE2-206ENST00000503291 PGBD1Q96JS3 809 aa23.33■■□□□ 1.33
CDC42SE2-206ENST00000503291 CCDC194A0A1B0GVG4 234 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 AP3B2Q13367 1082 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 FAM173BQ6P4H8 233 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 BRAPQ7Z569 592 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 MAF1Q9H063 256 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 COL20A1Q9P218 1284 aa23.33■■□□□ 1.32
CDC42SE2-206ENST00000503291 FAM205CA6NFA0 338 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 SPDYE3A6NKU9 549 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 FOSP01100 380 aaPredicted RBP23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 MCTP2Q6DN12 878 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 KRT25Q7Z3Z0 450 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 DNAJC5GQ8N7S2 189 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 FCER1AP12319 257 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 MAPK4P31152 587 aa23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 FOXD4L6Q3SYB3 417 aaPredicted RBP23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 FOXD4L3Q6VB84 417 aaPredicted RBP23.32■■□□□ 1.32
CDC42SE2-206ENST00000503291 ECM2O94769 699 aaPredicted RBP23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 KCTD2Q14681 263 aa23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 PURBQ96QR8 312 aaKnown RBP23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 MMP19Q99542 508 aa23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 ANO3Q9BYT9 981 aa23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 PFASO15067 1338 aa23.31■■□□□ 1.32
CDC42SE2-206ENST00000503291 MAP2K1Q02750 393 aaPredicted RBP23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 NONOQ15233 471 aaKnown RBP eCLIP23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 GPR142Q7Z601 462 aa23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 RBBP6Q7Z6E9 1792 aaKnown RBP23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 STRNO43815 780 aa23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 TAAR1Q96RJ0 339 aa23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 IVNS1ABPQ9Y6Y0 642 aa23.3■■□□□ 1.32
CDC42SE2-206ENST00000503291 INF2Q27J81 1249 aa23.29■■□□□ 1.32
CDC42SE2-206ENST00000503291 MYSM1Q5VVJ2 828 aa23.29■■□□□ 1.32
CDC42SE2-206ENST00000503291 PLEKHH3Q7Z736 793 aa23.29■■□□□ 1.32
CDC42SE2-206ENST00000503291 TBCKQ8TEA7 893 aa23.29■■□□□ 1.32
CDC42SE2-206ENST00000503291 ATP6V1DQ9Y5K8 247 aa23.29■■□□□ 1.32
CDC42SE2-206ENST00000503291 TNPO1Q92973 898 aaKnown RBP23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 POTEB2H3BUK9 544 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 PTPREP23469 700 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 CNTN2Q02246 1040 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 ABRAQ8N0Z2 381 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 RMDN3Q96TC7 470 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 SAGE1Q9NXZ1 904 aa23.28■■□□□ 1.32
CDC42SE2-206ENST00000503291 PGK2P07205 417 aa23.27■■□□□ 1.32
CDC42SE2-206ENST00000503291 TOB1P50616 345 aaPredicted RBP23.27■■□□□ 1.32
CDC42SE2-206ENST00000503291 RILPL1Q5EBL4 403 aa23.27■■□□□ 1.32
CDC42SE2-206ENST00000503291 DNAJC25-GNG10A0A024R161 153 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 ATP2B1P20020 1258 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 SP3Q02447 781 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 FAM133AQ8N9E0 248 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 CHAMP1Q96JM3 812 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 BEGAINQ9BUH8 593 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 ADORA2AP29274 412 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 SREBF1P36956 1147 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 UBXN2AP68543 259 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 LACTBP83111 547 aaPredicted RBP23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 CRYGNQ8WXF5 182 aa23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 NOL7Q9UMY1 257 aaKnown RBP23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 ZNFX1Q9P2E3 1918 aaKnown RBP23.26■■□□□ 1.31
CDC42SE2-206ENST00000503291 EDIL3O43854 480 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms