RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ALYREFQ86V81 257 aaKnown RBP18.61■□□□□ 0.57
HDAC6-236ENST00000498808 ZNF444Q8N0Y2 327 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-236ENST00000498808 MORC4Q8TE76 937 aa18.61■□□□□ 0.57
HDAC6-236ENST00000498808 POLR3EQ9NVU0 708 aa18.61■□□□□ 0.57
HDAC6-236ENST00000498808 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
HDAC6-236ENST00000498808 RAB11FIP3O75154 756 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 FAM160B2Q86V87 743 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 PPP1R13LQ8WUF5 828 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 OSBP2Q969R2 916 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 CHMP4CQ96CF2 233 aa18.6■□□□□ 0.57
HDAC6-236ENST00000498808 KIF28PB7ZC32 967 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 MYL3P08590 195 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 SNAP25P60880 206 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 NEDD1Q8NHV4 660 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 CHURC1Q8WUH1 139 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 GMCL1Q96IK5 515 aa18.59■□□□□ 0.57
HDAC6-236ENST00000498808 LCHNA4D1U4 455 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 HMMRO75330 724 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-236ENST00000498808 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 FAM47CQ5HY64 1035 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 NSMFQ6X4W1 530 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 GDPD5Q8WTR4 605 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-236ENST00000498808 WDR11Q9BZH6 1224 aa18.58■□□□□ 0.56
HDAC6-236ENST00000498808 FTOQ9C0B1 505 aaKnown RBP eCLIP18.58■□□□□ 0.56
HDAC6-236ENST00000498808 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 PLA2G6O60733 806 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 MCCP23508 829 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 SLC1A4P43007 532 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 TDO2P48775 406 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 CPT1AP50416 773 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 KCTD1Q719H9 257 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 RASGRP2Q7LDG7 609 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 ZNF287Q9HBT7 754 aa18.57■□□□□ 0.56
HDAC6-236ENST00000498808 TRIP12Q14669 1992 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-236ENST00000498808 RBM47A0AV96 593 aaKnown RBP18.56■□□□□ 0.56
HDAC6-236ENST00000498808 GPAA1O43292 621 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 BAIAP3O94812 1187 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 TSPY3P0CV98 308 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 TSPY8P0CW00 308 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 TMCO2Q7Z6W1 182 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-236ENST00000498808 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 OR6J1Q8NGC5 347 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 APPBP2Q92624 585 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 LMCD1Q9NZU5 365 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 PRR12Q9ULL5 1215 aa18.56■□□□□ 0.56
HDAC6-236ENST00000498808 PRR33A8MZF0 331 aa18.55■□□□□ 0.56
HDAC6-236ENST00000498808 ALDH5A1P51649 535 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-236ENST00000498808 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
HDAC6-236ENST00000498808 KBTBD3Q8NAB2 608 aa18.55■□□□□ 0.56
HDAC6-236ENST00000498808 UBE2ZQ9H832 354 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-236ENST00000498808 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-236ENST00000498808 CCPG1Q9ULG6 757 aa18.55■□□□□ 0.56
HDAC6-236ENST00000498808 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-236ENST00000498808 M0R2C6 588 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 KCNJ6P48051 423 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 WDR5P61964 334 aaKnown RBP18.54■□□□□ 0.56
HDAC6-236ENST00000498808 TFAP4Q01664 338 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 BAATQ14032 418 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-236ENST00000498808 GPNMBQ14956 572 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 FAM178BQ8IXR5 827 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 GJD3Q8N144 294 aa18.54■□□□□ 0.56
HDAC6-236ENST00000498808 DEFB103AP81534 67 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 PTPN11Q06124 597 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-236ENST00000498808 BFSP2Q13515 415 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 RCSD1Q6JBY9 416 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 SUGCTQ9HAC7 445 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
HDAC6-236ENST00000498808 ADD3Q9UEY8 706 aaKnown RBP18.53■□□□□ 0.56
HDAC6-236ENST00000498808 SIP14410 1827 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 A6NJR5 290 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 NFIBO00712 420 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 RNF113AO15541 343 aaKnown RBP18.52■□□□□ 0.56
HDAC6-236ENST00000498808 SMARCA5O60264 1052 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-236ENST00000498808 APPP05067 770 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 ICAM1P05362 532 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 GNAT2P19087 354 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 LEXMQ3ZCV2 418 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-236ENST00000498808 COPS5Q92905 334 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 MTUS1Q9ULD2 1270 aa18.52■□□□□ 0.56
HDAC6-236ENST00000498808 LOC102724159A0A0B4J2E5 919 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 RBAK-RBAKDNI3L0D1 243 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 IL9P15248 144 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 MRE11P49959 708 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 PDE4BQ07343 736 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 PPP2R5BQ15173 497 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 PWP2Q15269 919 aaKnown RBP18.51■□□□□ 0.55
HDAC6-236ENST00000498808 TCTN1Q2MV58 587 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 LRRFIP1Q32MZ4 808 aaKnown RBP18.51■□□□□ 0.55
HDAC6-236ENST00000498808 SLC30A10Q6XR72 485 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
HDAC6-236ENST00000498808 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
HDAC6-236ENST00000498808 NOD1Q9Y239 953 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 656.9 ms