RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 MAP3K14Q99558 947 aa23.98■■□□□ 1.43
COL9A2-211ENST00000496215 MYL10Q9BUA6 226 aa23.98■■□□□ 1.43
COL9A2-211ENST00000496215 MAF1Q9H063 256 aa23.98■■□□□ 1.43
COL9A2-211ENST00000496215 MRPL11Q9Y3B7 192 aaKnown RBP23.98■■□□□ 1.43
COL9A2-211ENST00000496215 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.97■■□□□ 1.43
COL9A2-211ENST00000496215 PTGS1P23219 599 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 KIF5BP33176 963 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 KRT32Q14532 448 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 MCF2L2Q86YR7 1114 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 MORC4Q8TE76 937 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 NEK1Q96PY6 1258 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 VTA1Q9NP79 307 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 PHF24Q9UPV7 400 aa23.97■■□□□ 1.43
COL9A2-211ENST00000496215 LTBP2Q14767 1821 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 REC8O95072 547 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 LIFRP42702 1097 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 EEPD1Q7L9B9 569 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 DNERQ8NFT8 737 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 GDF15Q99988 308 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 LRRC2Q9BYS8 371 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 RIOX1Q9H6W3 641 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 SPC25Q9HBM1 224 aa23.96■■□□□ 1.43
COL9A2-211ENST00000496215 PPP1R11O60927 126 aaPredicted RBP23.95■■□□□ 1.42
COL9A2-211ENST00000496215 FXR1P51114 621 aaKnown RBP eCLIP23.95■■□□□ 1.42
COL9A2-211ENST00000496215 RTP1P59025 263 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 TNFAIP2Q03169 654 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 TRAF1Q13077 416 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 SNX17Q15036 470 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 TSGA10IPQ3SY00 556 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 TMEM63BQ5T3F8 832 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 CCSAPQ6IQ19 270 aaPredicted RBP23.95■■□□□ 1.42
COL9A2-211ENST00000496215 SLC39A5Q6ZMH5 540 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 RASEFQ8IZ41 740 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 KLHDC9Q8NEP7 349 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 PIGSQ96S52 555 aa23.95■■□□□ 1.42
COL9A2-211ENST00000496215 B4DLN1 442 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 CTAGE5O15320 804 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 C6orf222P0C671 652 aaPredicted RBP23.94■■□□□ 1.42
COL9A2-211ENST00000496215 CALM1P0DP23 149 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 CALM2P0DP24 149 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 CALM3P0DP25 149 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 MRPL12P52815 198 aaKnown RBP23.94■■□□□ 1.42
COL9A2-211ENST00000496215 PDE4DQ08499 809 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 NOL8Q76FK4 1167 aaKnown RBP23.94■■□□□ 1.42
COL9A2-211ENST00000496215 UPF3AQ9H1J1 476 aaKnown RBP23.94■■□□□ 1.42
COL9A2-211ENST00000496215 PDGFCQ9NRA1 345 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 PCDHA1Q9Y5I3 950 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 SLC12A7Q9Y666 1083 aa23.94■■□□□ 1.42
COL9A2-211ENST00000496215 A0A1W2PQ45 241 aaPredicted RBP23.93■■□□□ 1.42
COL9A2-211ENST00000496215 A0A1W2PQY0 241 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 CYTH3O43739 400 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 CST5P28325 142 aaPredicted RBP23.93■■□□□ 1.42
COL9A2-211ENST00000496215 MAGEA10P43363 369 aaPredicted RBP23.93■■□□□ 1.42
COL9A2-211ENST00000496215 ADCK5Q3MIX3 580 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 TRIM60Q495X7 471 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 TAPT1Q6NXT6 567 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 TLK2Q86UE8 772 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 TBC1D5Q92609 795 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 TSEN34Q9BSV6 310 aaKnown RBP23.93■■□□□ 1.42
COL9A2-211ENST00000496215 SPZ1Q9BXG8 430 aa23.93■■□□□ 1.42
COL9A2-211ENST00000496215 MOXD2PA6NHM9 499 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 CFBP00751 764 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 EDNRBP24530 442 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 HSPA4P34932 840 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 GJA9P57773 515 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 DHX32Q7L7V1 743 aaKnown RBP23.92■■□□□ 1.42
COL9A2-211ENST00000496215 SGMS1Q86VZ5 419 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 SYTL5Q8TDW5 730 aaPredicted RBP23.92■■□□□ 1.42
COL9A2-211ENST00000496215 LZTS2Q9BRK4 669 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 ATP11BQ9Y2G3 1177 aa23.92■■□□□ 1.42
COL9A2-211ENST00000496215 PNMA6FA0A0J9YX94 578 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 HMGB1P09429 215 aaKnown RBP23.91■■□□□ 1.42
COL9A2-211ENST00000496215 RXRAP19793 462 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 GNAQP50148 359 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 ACLYP53396 1101 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 MICU3Q86XE3 530 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 PCSK9Q8NBP7 692 aaKnown RBP23.91■■□□□ 1.42
COL9A2-211ENST00000496215 TCEANC2Q96MN5 208 aa23.91■■□□□ 1.42
COL9A2-211ENST00000496215 GNEQ9Y223 722 aaKnown RBP23.91■■□□□ 1.42
COL9A2-211ENST00000496215 BAZ2BQ9UIF8 2168 aaKnown RBP23.91■■□□□ 1.42
COL9A2-211ENST00000496215 OPLAHO14841 1288 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 SMPD1P17405 629 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 HSD17B4P51659 736 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 KCNA10Q16322 511 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 IQSEC1Q6DN90 963 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 SYNE3Q6ZMZ3 975 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 RAB11FIP4Q86YS3 637 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 NSUN6Q8TEA1 469 aaKnown RBP23.9■■□□□ 1.42
COL9A2-211ENST00000496215 PIBF1Q8WXW3 757 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 RRP36Q96EU6 259 aaKnown RBP23.9■■□□□ 1.42
COL9A2-211ENST00000496215 AP5M1Q9H0R1 490 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 COL20A1Q9P218 1284 aa23.9■■□□□ 1.42
COL9A2-211ENST00000496215 SEC63Q9UGP8 760 aaKnown RBP23.9■■□□□ 1.42
COL9A2-211ENST00000496215 LAMA2P24043 3122 aaKnown RBP23.89■■□□□ 1.42
COL9A2-211ENST00000496215 PLEKHA8P1O95397 391 aa23.89■■□□□ 1.41
COL9A2-211ENST00000496215 SMARCA1P28370 1054 aa23.89■■□□□ 1.41
COL9A2-211ENST00000496215 NKX3-2P78367 333 aa23.89■■□□□ 1.41
COL9A2-211ENST00000496215 EXOSC10Q01780 885 aaKnown RBP23.89■■□□□ 1.41
COL9A2-211ENST00000496215 GHRHRQ02643 423 aa23.89■■□□□ 1.41
COL9A2-211ENST00000496215 C1orf53Q5VUE5 145 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms