RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 CFAP47Q6ZTR5 3102 aa7.98□□□□□ -1.13
VPS52-219ENST00000493379 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 A0A1W2PRG0 241 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 BMP1P13497 986 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 AKR1B1P15121 316 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 TDO2P48775 406 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 PTH1RQ03431 593 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 PDE4BQ07343 736 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 SPP2Q13103 211 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 COL9A2Q14055 689 aaPredicted RBP7.97□□□□□ -1.13
VPS52-219ENST00000493379 SEPT2Q15019 361 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 NECTIN1Q15223 517 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 SHROOM1Q2M3G4 852 aaPredicted RBP7.97□□□□□ -1.13
VPS52-219ENST00000493379 C9orf50Q5SZB4 431 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 AKNAD1Q5T1N1 836 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 SH3RF1Q7Z6J0 888 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 ZBTB33Q86T24 672 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 ANKS1AQ92625 1134 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 KCNB2Q92953 911 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 LSG1Q9H089 658 aaKnown RBP7.97□□□□□ -1.13
VPS52-219ENST00000493379 MTMR4Q9NYA4 1195 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 ZMIZ1Q9ULJ6 1067 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 TMX2Q9Y320 296 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 CHD6Q8TD26 2715 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 MYH1P12882 1939 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 MYPNQ86TC9 1320 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 DNAH12Q6ZR08 3092 aa7.97□□□□□ -1.13
VPS52-219ENST00000493379 SETXQ7Z333 2677 aaKnown RBP7.96□□□□□ -1.13
VPS52-219ENST00000493379 CCL15-CCL14A0A0B4J2E2 113 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 MINDY4BA8MYZ0 360 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 ZNF213O14771 459 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 TLR2O60603 784 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 GDF11O95390 407 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
VPS52-219ENST00000493379 ELNP15502 786 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 PSMC4P43686 418 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 KCNQ1P51787 676 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 USP14P54578 494 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 PRMT2P55345 433 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 TFF2Q03403 129 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 NCOA4Q13772 614 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 SHHQ15465 462 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 CCL15Q16663 113 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 LBX2Q6XYB7 198 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 ZNF444Q8N0Y2 327 aaPredicted RBP7.96□□□□□ -1.14
VPS52-219ENST00000493379 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 TTC14Q96N46 770 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 MTA3Q9BTC8 594 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 MKNK2Q9HBH9 465 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 IL17RBQ9NRM6 502 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.96□□□□□ -1.14
VPS52-219ENST00000493379 AGTPBP1Q9UPW5 1226 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 OTOFQ9HC10 1997 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 ADGRA2Q96PE1 1338 aa7.96□□□□□ -1.14
VPS52-219ENST00000493379 TPRP12270 2363 aaKnown RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 LZTS3O60299 673 aaPredicted RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 CDC45O75419 566 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 S1PR4O95977 384 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 CYP21A2P08686 494 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 PRKCZQ05513 592 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 MAP7D1Q3KQU3 841 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 TMEM164Q5U3C3 297 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 C17orf99Q6UX52 265 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 ACER1Q8TDN7 264 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 STK32AQ8WU08 396 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 LPAR1Q92633 364 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 UIMC1Q96RL1 719 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 RNF41Q9H4P4 317 aaPredicted RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 INCENPQ9NQS7 918 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 GABRQQ9UN88 632 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 ADAMTS5Q9UNA0 930 aa7.95□□□□□ -1.14
VPS52-219ENST00000493379 NOVA2Q9UNW9 492 aaKnown RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 ZFHX2Q9C0A1 2572 aaPredicted RBP7.95□□□□□ -1.14
VPS52-219ENST00000493379 PHIPQ8WWQ0 1821 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 AK9Q5TCS8 1911 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 TRIM75PA6NK02 468 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 PDHXO00330 501 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 PLA2G6O60733 806 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 GNRH1P01148 92 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 INHAP05111 366 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 BCRP11274 1271 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 EEF2P13639 858 aaKnown RBP7.94□□□□□ -1.14
VPS52-219ENST00000493379 HMGCS2P54868 508 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 TFAP4Q01664 338 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 IMMTQ16891 758 aaKnown RBP7.94□□□□□ -1.14
VPS52-219ENST00000493379 KIAA1755Q5JYT7 1200 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 TMCO4Q5TGY1 634 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 RCSD1Q6JBY9 416 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 TRAF7Q6Q0C0 670 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 CATSPERGQ6ZRH7 1159 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 MFSD6Q6ZSS7 791 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 CCDC84Q86UT8 332 aaPredicted RBP7.94□□□□□ -1.14
VPS52-219ENST00000493379 DGKHQ86XP1 1220 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 TBC1D10CQ8IV04 446 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 GMCL1P1Q8NEA9 526 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 BAP1Q92560 729 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 IL17RAQ96F46 866 aa7.94□□□□□ -1.14
VPS52-219ENST00000493379 VCPKMTQ9H867 229 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms