RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 IKBKBO14920 756 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 FOSP01100 380 aaPredicted RBP10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 DPYDQ12882 1025 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 MORC3Q14149 939 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 RRAGBQ5VZM2 374 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 CCDC174Q6PII3 467 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 USP17L6PQ6QN14 398 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 MOXD1Q6UVY6 613 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 FAM43AQ8N2R8 423 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 MLKLQ8NB16 471 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 SPATA20Q8TB22 786 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 MTMR9Q96QG7 549 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 RAB34Q9BZG1 259 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 TRIM5Q9C035 493 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 KIAA1683Q9H0B3 1180 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 CUEDC2Q9H467 287 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 ABCB11O95342 1321 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 PITPNM2Q9BZ72 1349 aa10.33□□□□□ -0.76
SMARCC1-208ENST00000492896 SSC5DA1L4H1 1573 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 ESPNB1AK53 854 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 MEIS2O14770 477 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 EDIL3O43854 480 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 CDC25BP30305 580 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 INPP5BP32019 993 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 TECP42680 631 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 TXKP42681 527 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 USP11P51784 963 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 USP14P54578 494 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 MYL5Q02045 173 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 IGSF22Q8N9C0 903 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 CALML4Q96GE6 196 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 GSDMAQ96QA5 445 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 AS3MTQ9HBK9 375 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 ZNF112Q9UJU3 913 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 MRPL11Q9Y3B7 192 aaKnown RBP10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 RLFQ13129 1914 aa10.32□□□□□ -0.76
SMARCC1-208ENST00000492896 LOXHD1Q8IVV2 1947 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 CYP3A7-CYP3A51PA0A087WV96 503 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 OPLAHO14841 1288 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 MARCH6O60337 910 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 MYL1P05976 194 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 TPM3P06753 285 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 PLCG1P19174 1290 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 BMP6P22004 513 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 CYP3A7P24462 503 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 CDC25AP30304 524 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 SREBF1P36956 1147 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 EPS15P42566 896 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 NCAPHQ15003 741 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 CT47A1Q5JQC4 288 aaPredicted RBP10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 MRFAP1L1Q96HT8 127 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 MBOAT7Q96N66 472 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 WRNIP1Q96S55 665 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 SLF1Q9BQI6 1058 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 SYT17Q9BSW7 474 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 EHMT1Q9H9B1 1298 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 PICK1Q9NRD5 415 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 ADARB2Q9NS39 739 aaKnown RBP10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 FBXO28Q9NVF7 368 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 RMND1Q9NWS8 449 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 LOC285556D6RIA3 1793 aa10.31□□□□□ -0.76
SMARCC1-208ENST00000492896 SCN4AP35499 1836 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 GCOM1H8Y6P7 765 aaPredicted RBP10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 POLR2MP0CAP2 368 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 MSNP26038 577 aaKnown RBP10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 CASP1P29466 404 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 HIRAP54198 1017 aaPredicted RBP10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 MTMR2Q13614 643 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 CUL4BQ13620 913 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 DRC7Q8IY82 874 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 SPC24Q8NBT2 197 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 STAMQ92783 540 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 CDK5RAP3Q96JB5 506 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 BLZF1Q9H2G9 400 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 STK17AQ9UEE5 414 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 ZKSCAN5Q9Y2L8 839 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms