RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TAL1P17542 331 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 CYP4F8P98187 520 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 FAM209AQ5JX71 171 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 ACBD5Q5T8D3 534 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 FYB2Q5VWT5 728 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 CABP7Q86V35 215 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 OSBP2Q969R2 916 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 ASIC4Q96FT7 647 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 CHAMP1Q96JM3 812 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 PLCD4Q9BRC7 762 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 DHRS4Q9BTZ2 278 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 SLC6A17Q9H1V8 727 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 BTG4Q9NY30 223 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 PTCH2Q9Y6C5 1203 aa7.23□□□□□ -1.25
HMGB1P38-201ENST00000490557 PAPLNO95428 1278 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 ITGB5P18084 799 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 PDE6BP35913 854 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 CORO7P57737 925 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 SLC35F1Q5T1Q4 408 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 NLRX1Q86UT6 975 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 PDLIM7Q9NR12 457 aa7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 TMA7Q9Y2S6 64 aaKnown RBP7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 MRPS23Q9Y3D9 190 aaKnown RBP7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 TIMM13Q9Y5L4 95 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P38-201ENST00000490557 CCDC163A0A0D9SF12 145 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 C7orf72A4D263 438 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 CAPNS1P04632 268 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 PNLIPP16233 465 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 GALK1P51570 392 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 GTF2A2P52657 109 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 CYP4F3Q08477 520 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 BICRALQ6AI39 1079 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 LZTR1Q8N653 840 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 KREMEN2Q8NCW0 462 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 DCAF4Q8WV16 495 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 SP110Q9HB58 689 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 GULP1Q9UBP9 304 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 ACSL6Q9UKU0 697 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 YBX2Q9Y2T7 364 aaKnown RBP7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
HMGB1P38-201ENST00000490557 BLACEA4D250 179 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 TACR1P25103 407 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 INF2Q27J81 1249 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 FOXB2Q5VYV0 432 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 INTS4Q96HW7 963 aaKnown RBP7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 EXOC2Q96KP1 924 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 PHF20Q9BVI0 1012 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 MARCH2Q9P0N8 246 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 PCDHA2Q9Y5H9 948 aa7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 MRPL42Q9Y6G3 142 aaKnown RBP7.2□□□□□ -1.26
HMGB1P38-201ENST00000490557 NOTOA8MTQ0 251 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 CEBPAP49715 358 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 MVKQ03426 396 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 XP32Q5T750 250 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 DENND5AQ6IQ26 1287 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 HOMER1Q86YM7 354 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 CCDC103Q8IW40 242 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 JMYQ8N9B5 988 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 RCBTB1Q8NDN9 531 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 NLGN2Q8NFZ4 835 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 RNPC3Q96LT9 517 aaKnown RBP7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
HMGB1P38-201ENST00000490557 FUCA1P04066 466 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 MPOP05164 745 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 GABREP78334 506 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 TESK1Q15569 626 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 RSPO2Q6UXX9 243 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 APPBP2Q92624 585 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 TRMT2BQ96GJ1 504 aaKnown RBP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 TMEM169Q96HH4 297 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 ZFYVE21Q9BQ24 234 aa7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 DBR1Q9UK59 544 aaKnown RBP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 COA3Q9Y2R0 106 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P38-201ENST00000490557 ESYT3A0FGR9 886 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 OR14I1A6ND48 311 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 AQP7O14520 342 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 MSL3P1P0C860 447 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 LCP1P13796 627 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 BCL6P41182 706 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 TMEM62Q0P6H9 643 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 LSAMPQ13449 338 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 NTRK3Q16288 839 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 OLFML2BQ68BL8 750 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 STYK1Q6J9G0 422 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 KCNT2Q6UVM3 1135 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 CEP68Q76N32 757 aa7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 MTDHQ86UE4 582 aaKnown RBP7.17□□□□□ -1.26
HMGB1P38-201ENST00000490557 JAZF1Q86VZ6 243 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms