RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
HDAC7-224ENST00000488927 B4DLN1 442 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 GCOM1H8Y6P7 765 aaPredicted RBP18.39■□□□□ 0.53
HDAC7-224ENST00000488927 LARGE1O95461 756 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 CFBP00751 764 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 HMGCRP04035 888 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 POLR2MP0CAP2 368 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
HDAC7-224ENST00000488927 NAPAP54920 295 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 UBXN2AP68543 259 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 WWC2Q6AWC2 1192 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 NPLOC4Q8TAT6 608 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 WASF1Q92558 559 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 CUL5Q93034 780 aa18.39■□□□□ 0.53
HDAC7-224ENST00000488927 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
HDAC7-224ENST00000488927 CALML3P27482 149 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 HSD17B4P51659 736 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 PKN1Q16512 942 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 CCDC148Q8NFR7 591 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 DNERQ8NFT8 737 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 GPKOWQ92917 476 aaPredicted RBP eCLIP18.38■□□□□ 0.53
HDAC7-224ENST00000488927 PSTPIP2Q9H939 334 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
HDAC7-224ENST00000488927 BIN2Q9UBW5 565 aaPredicted RBP18.38■□□□□ 0.53
HDAC7-224ENST00000488927 BAZ2BQ9UIF8 2168 aaKnown RBP18.38■□□□□ 0.53
HDAC7-224ENST00000488927 MYH6P13533 1939 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 ASB14A6NK59 587 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 STXBP3O00186 592 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 PIK3CDO00329 1044 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 OPLAHO14841 1288 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 ELNP15502 786 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 XBP1P17861 261 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 MAMDC4Q6UXC1 1216 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 SYTL5Q8TDW5 730 aaPredicted RBP18.37■□□□□ 0.53
HDAC7-224ENST00000488927 TRIB2Q92519 343 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 ARMC5Q96C12 935 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 TINF2Q9BSI4 451 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
HDAC7-224ENST00000488927 ESYT2A0FGR8 921 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 CTDNEP1O95476 244 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 CCL14Q16627 93 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 NSUN7Q8NE18 718 aaKnown RBP18.36■□□□□ 0.53
HDAC7-224ENST00000488927 TMX3Q96JJ7 454 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 NRBP1Q9UHY1 535 aa18.36■□□□□ 0.53
HDAC7-224ENST00000488927 IGHA2P01877 340 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 INHAP05111 366 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 GNA11P29992 359 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 ADCY7P51828 1080 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
HDAC7-224ENST00000488927 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 SMARCC2Q8TAQ2 1214 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 NSUN6Q8TEA1 469 aaKnown RBP18.35■□□□□ 0.53
HDAC7-224ENST00000488927 SH3TC2Q8TF17 1288 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 TBC1D5Q92609 795 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 C6orf50Q9HD87 102 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 RIC8AQ9NPQ8 531 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 FLRT1Q9NZU1 646 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-224ENST00000488927 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
HDAC7-224ENST00000488927 SOWAHBA6NEL2 793 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 PPFIA3O75145 1194 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 CD2BP2O95400 341 aaKnown RBP18.34■□□□□ 0.53
HDAC7-224ENST00000488927 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-224ENST00000488927 TNS4Q8IZW8 715 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 BICD2Q8TD16 824 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 SNX21Q969T3 373 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 ZNF333Q96JL9 665 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 FGD4Q96M96 766 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 IWS1Q96ST2 819 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 ZMYND12Q9H0C1 365 aa18.34■□□□□ 0.53
HDAC7-224ENST00000488927 MEIS2O14770 477 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-224ENST00000488927 ST3GAL1Q11201 340 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 ARHGEF16Q5VV41 709 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 GALNT17Q6IS24 598 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 MORC4Q8TE76 937 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 EHMT1Q9H9B1 1298 aa18.33■□□□□ 0.52
HDAC7-224ENST00000488927 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 RPTORQ8N122 1335 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 ZNFX1Q9P2E3 1918 aaKnown RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 SPDYE3A6NKU9 549 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 FOSP01100 380 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
HDAC7-224ENST00000488927 CYP2C19P33261 490 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 NLRP5P59047 1200 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 ARMCX2Q7L311 632 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 TAAR1Q96RJ0 339 aa18.32■□□□□ 0.52
HDAC7-224ENST00000488927 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms