RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 KIAA1211Q6ZU35 1233 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
SCFD1-206ENST00000484733 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.261e-9■□□□□ 11.2
SCFD1-206ENST00000484733 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 EDNRBP24530 442 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 RNF207Q6ZRF8 634 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 C16orf59Q7L2K0 433 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 IQCA1Q86XH1 822 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 FAM161BQ96MY7 647 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 MPHOSPH6Q99547 160 aaKnown RBP13.45□□□□□ -0.26
SCFD1-206ENST00000484733 GRIN2DO15399 1336 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 LAMA3Q16787 3333 aa13.45□□□□□ -0.26
SCFD1-206ENST00000484733 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCFD1-206ENST00000484733 CWC27Q6UX04 472 aaKnown RBP13.44□□□□□ -0.26
SCFD1-206ENST00000484733 SLC30A10Q6XR72 485 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 EEPD1Q7L9B9 569 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 POLR3EQ9NVU0 708 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
SCFD1-206ENST00000484733 B4DLN1 442 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 MRPL12P52815 198 aaKnown RBP13.44□□□□□ -0.26
SCFD1-206ENST00000484733 PSRC1Q6PGN9 363 aaPredicted RBP13.44□□□□□ -0.26
SCFD1-206ENST00000484733 WDR11Q9BZH6 1224 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 IL23AQ9NPF7 189 aa13.44□□□□□ -0.26
SCFD1-206ENST00000484733 TMEM63BQ5T3F8 832 aa13.43□□□□□ -0.26
SCFD1-206ENST00000484733 KDM4AO75164 1064 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 ABCB11O95342 1321 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 CSF2RAP15509 400 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 CALML3P27482 149 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 CPT1AP50416 773 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 RPS6P62753 249 aaKnown RBP13.42□□□□□ -0.26
SCFD1-206ENST00000484733 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
SCFD1-206ENST00000484733 ASPRV1Q53RT3 343 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 HERVK_113Q902F9 699 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 ZSCAN10Q96SZ4 725 aaPredicted RBP13.42□□□□□ -0.26
SCFD1-206ENST00000484733 ZKSCAN3Q9BRR0 538 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 KRT23Q9C075 422 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 KAT14Q9H8E8 782 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 KPNA6O60684 536 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 PTGS1P23219 599 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 PDE4DQ08499 809 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
SCFD1-206ENST00000484733 PPP1R12CQ9BZL4 782 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 CNNM2Q9H8M5 875 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 ZSWIM5Q9P217 1185 aa13.42□□□□□ -0.26
SCFD1-206ENST00000484733 CYP2C18P33260 490 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 HIPK3Q9H422 1215 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 B4E1Z4 1266 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 B4GALT4O60513 344 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 GOLGA8HP0CJ92 632 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 DNAJB2P25686 324 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 PURAQ00577 322 aaKnown RBP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 ENAHQ8N8S7 591 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 OR6J1Q8NGC5 347 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 MYLIPQ8WY64 445 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
SCFD1-206ENST00000484733 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
SCFD1-206ENST00000484733 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 PSMC6P62333 389 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 CDC37Q16543 378 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 MCF2L2Q86YR7 1114 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 ADGRF4Q8IZF3 695 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 RAD50Q92878 1312 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 A6NJR5 290 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 FGBP02675 491 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 ACRP10323 421 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 PTPN11Q06124 597 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 RPUSD2Q8IZ73 545 aaKnown RBP13.4□□□□□ -0.26
SCFD1-206ENST00000484733 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
SCFD1-206ENST00000484733 TNKSO95271 1327 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
SCFD1-206ENST00000484733 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 ZNF576Q9H609 170 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 MRPL11Q9Y3B7 192 aaKnown RBP13.39□□□□□ -0.27
SCFD1-206ENST00000484733 SCN10AQ9Y5Y9 1956 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 MYL3P08590 195 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 FOSL2P15408 326 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 GHRHRQ02643 423 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 USH1GQ495M9 461 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 SYTL5Q8TDW5 730 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-206ENST00000484733 CPVLQ9H3G5 476 aa13.39□□□□□ -0.27
SCFD1-206ENST00000484733 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-206ENST00000484733 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 PFKMP08237 780 aa13.38□□□□□ -0.27
SCFD1-206ENST00000484733 TXNP10599 105 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms