RNA–Protein interactions for RNA: ENST00000484266.5

CHKB-210, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 1,401 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-210ENST00000484266 NOL8Q76FK4 1167 aaKnown RBP38.01■■■■□ 3.68
CHKB-210ENST00000484266 UNC93B1Q9H1C4 597 aa38.01■■■■□ 3.68
CHKB-210ENST00000484266 CCL5P13501 91 aa38■■■■□ 3.67
CHKB-210ENST00000484266 MAMDC4Q6UXC1 1216 aa38■■■■□ 3.67
CHKB-210ENST00000484266 MSL3Q8N5Y2 521 aaKnown RBP38■■■■□ 3.67
CHKB-210ENST00000484266 GHRHRQ02643 423 aa37.99■■■■□ 3.67
CHKB-210ENST00000484266 PFKFB2O60825 505 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 IFNAR1P17181 557 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 SCRN1Q12765 414 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 RABEP1Q15276 862 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 PHKBQ93100 1093 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 SLKQ9H2G2 1235 aaPredicted RBP37.98■■■■□ 3.67
CHKB-210ENST00000484266 RPTORQ8N122 1335 aa37.98■■■■□ 3.67
CHKB-210ENST00000484266 CFBP00751 764 aa37.97■■■■□ 3.67
CHKB-210ENST00000484266 GPKOWQ92917 476 aaPredicted RBP eCLIP37.97■■■■□ 3.67
CHKB-210ENST00000484266 RNF208Q9H0X6 261 aa37.97■■■■□ 3.67
CHKB-210ENST00000484266 HMX1Q9NP08 348 aaPredicted RBP37.97■■■■□ 3.67
CHKB-210ENST00000484266 SYNGAP1Q96PV0 1343 aa37.97■■■■□ 3.67
CHKB-210ENST00000484266 LARGE1O95461 756 aa37.96■■■■□ 3.67
CHKB-210ENST00000484266 HSD17B4P51659 736 aa37.96■■■■□ 3.67
CHKB-210ENST00000484266 ME3Q16798 604 aa37.96■■■■□ 3.67
CHKB-210ENST00000484266 HEATR3Q7Z4Q2 680 aa37.96■■■■□ 3.67
CHKB-210ENST00000484266 SYTL5Q8TDW5 730 aaPredicted RBP37.96■■■■□ 3.67
CHKB-210ENST00000484266 COL20A1Q9P218 1284 aa37.96■■■■□ 3.67
CHKB-210ENST00000484266 PRPF3O43395 683 aaKnown RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 CYBAP13498 195 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 WWC2Q6AWC2 1192 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 TRPV1Q8NER1 839 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 RNF26Q9BY78 433 aaPredicted RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 PAK6Q9NQU5 681 aaPredicted RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 BRCA2P51587 3418 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 PPFIA3O75145 1194 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 CCND3P30281 292 aaPredicted RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 SAMD3Q8N6K7 520 aa37.95■■■■□ 3.67
CHKB-210ENST00000484266 XRN2Q9H0D6 950 aaKnown RBP eCLIP37.95■■■■□ 3.673e-11■□□□□ 9.9
CHKB-210ENST00000484266 MAP3K20Q9NYL2 800 aaKnown RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 ADD3Q9UEY8 706 aaKnown RBP37.95■■■■□ 3.67
CHKB-210ENST00000484266 CPLX1O14810 134 aa37.94■■■■□ 3.66
CHKB-210ENST00000484266 SNAI1O95863 264 aaPredicted RBP37.94■■■■□ 3.66
CHKB-210ENST00000484266 ALDH5A1P51649 535 aaPredicted RBP37.94■■■■□ 3.66
CHKB-210ENST00000484266 PRAMEF19Q5SWL8 479 aa37.94■■■■□ 3.66
CHKB-210ENST00000484266 ARMCX2Q7L311 632 aa37.94■■■■□ 3.66
CHKB-210ENST00000484266 TMEM106CQ9BVX2 250 aa37.94■■■■□ 3.66
CHKB-210ENST00000484266 RBM27Q9P2N5 1060 aaKnown RBP37.94■■■■□ 3.66
CHKB-210ENST00000484266 LRRC37A2A6NM11 1700 aa37.93■■■■□ 3.66
CHKB-210ENST00000484266 KIAA0100Q14667 2235 aaKnown RBP37.93■■■■□ 3.66
CHKB-210ENST00000484266 PKN1Q16512 942 aa37.93■■■■□ 3.66
CHKB-210ENST00000484266 PFKFB3Q16875 520 aaPredicted RBP37.93■■■■□ 3.66
CHKB-210ENST00000484266 SLC26A6Q9BXS9 759 aa37.93■■■■□ 3.66
CHKB-210ENST00000484266 ASB14A6NK59 587 aa37.92■■■■□ 3.66
CHKB-210ENST00000484266 HOXA13P31271 388 aaPredicted RBP37.92■■■■□ 3.66
CHKB-210ENST00000484266 TYW1BQ6NUM6 668 aa37.92■■■■□ 3.66
CHKB-210ENST00000484266 DNERQ8NFT8 737 aa37.92■■■■□ 3.66
CHKB-210ENST00000484266 CDKN2AIPQ9NXV6 580 aaPredicted RBP37.92■■■■□ 3.66
CHKB-210ENST00000484266 NRBP1Q9UHY1 535 aa37.92■■■■□ 3.66
CHKB-210ENST00000484266 DDX49Q9Y6V7 483 aaKnown RBP37.92■■■■□ 3.66
CHKB-210ENST00000484266 hCG_1984214I3L0E3 225 aa37.91■■■■□ 3.66
CHKB-210ENST00000484266 SCG2P13521 617 aa37.91■■■■□ 3.66
CHKB-210ENST00000484266 CPLX2Q6PUV4 134 aaKnown RBP37.91■■■■□ 3.66
CHKB-210ENST00000484266 ZNF713Q8N859 430 aaPredicted RBP37.91■■■■□ 3.66
CHKB-210ENST00000484266 NECAB1Q8N987 351 aa37.91■■■■□ 3.66
CHKB-210ENST00000484266 TAAR1Q96RJ0 339 aa37.91■■■■□ 3.66
CHKB-210ENST00000484266 LIMCH1Q9UPQ0 1083 aa37.91■■■■□ 3.66
CHKB-210ENST00000484266 LOC102724159A0A0B4J2E5 919 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 GCOM1H8Y6P7 765 aaPredicted RBP37.9■■■■□ 3.66
CHKB-210ENST00000484266 STXBP3O00186 592 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 POLR2MP0CAP2 368 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 AKAP17AQ02040 695 aaKnown RBP37.9■■■■□ 3.66
CHKB-210ENST00000484266 PWP2Q15269 919 aaKnown RBP37.9■■■■□ 3.66
CHKB-210ENST00000484266 MORC4Q8TE76 937 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 GTF3C6Q969F1 213 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 BARHL2Q9NY43 387 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 CNPY2Q9Y2B0 182 aa37.9■■■■□ 3.66
CHKB-210ENST00000484266 POTEFA5A3E0 1075 aa37.89■■■■□ 3.66
CHKB-210ENST00000484266 GJB1P08034 283 aa37.89■■■■□ 3.66
CHKB-210ENST00000484266 SOX10P56693 466 aa37.89■■■■□ 3.66
CHKB-210ENST00000484266 FRMPD3Q5JV73 1810 aa37.89■■■■□ 3.66
CHKB-210ENST00000484266 NAPAP54920 295 aa37.88■■■■□ 3.66
CHKB-210ENST00000484266 SSRP1Q08945 709 aaKnown RBP37.88■■■■□ 3.66
CHKB-210ENST00000484266 PPP1R18Q6NYC8 613 aa37.88■■■■□ 3.66
CHKB-210ENST00000484266 DEFB118Q96PH6 123 aa37.88■■■■□ 3.66
CHKB-210ENST00000484266 ZNF865P0CJ78 1059 aaPredicted RBP37.87■■■■□ 3.65
CHKB-210ENST00000484266 TRIM22Q8IYM9 498 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 IL27Q8NEV9 243 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 KATNBL1Q9H079 304 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 MEIS2O14770 477 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 CNGA1P29973 690 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 RMDN3Q96TC7 470 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 ABHD16BQ9H3Z7 469 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 PSTPIP2Q9H939 334 aa37.87■■■■□ 3.65
CHKB-210ENST00000484266 PIK3CDO00329 1044 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 ST18O60284 1047 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 CDKL5O76039 1030 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 CTDNEP1O95476 244 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 EDNRBP24530 442 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 USP17L6PQ6QN14 398 aa37.86■■■■□ 3.65
CHKB-210ENST00000484266 NSUN6Q8TEA1 469 aaKnown RBP37.86■■■■□ 3.65
CHKB-210ENST00000484266 GJA8P48165 433 aa37.85■■■■□ 3.65
CHKB-210ENST00000484266 ST3GAL1Q11201 340 aa37.85■■■■□ 3.65
CHKB-210ENST00000484266 ACVR2BQ13705 512 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms