RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 DUSP11O75319 330 aaKnown RBP8.2□□□□□ -1.1
CHD6-209ENST00000482596 GJB5O95377 273 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 CLCN5P51795 746 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 GPM6BQ13491 265 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 LBX2Q6XYB7 198 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 LDHAL6AQ6ZMR3 332 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 CATSPERGQ6ZRH7 1159 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 DTWD2Q8NBA8 298 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 KREMEN2Q8NCW0 462 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 FLCNQ8NFG4 579 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 RIN2Q8WYP3 895 aaPredicted RBP8.2□□□□□ -1.1
CHD6-209ENST00000482596 PHF7Q9BWX1 381 aaPredicted RBP8.2□□□□□ -1.1
CHD6-209ENST00000482596 CNNM1Q9NRU3 951 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 SLC5A4Q9NY91 659 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
CHD6-209ENST00000482596 MCM3APO60318 1980 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 PIEZO2Q9H5I5 2752 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 H3BNC9 293 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 PSMC6P62333 389 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 SHC2P98077 582 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 IFIT5Q13325 482 aaKnown RBP8.19□□□□□ -1.1
CHD6-209ENST00000482596 GCKRQ14397 625 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 TCTN1Q2MV58 587 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 SMRP1Q8NCR6 262 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 PLEKHF1Q96S99 279 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 CRBNQ96SW2 442 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 PUS3Q9BZE2 481 aaKnown RBP8.19□□□□□ -1.1
CHD6-209ENST00000482596 UPF3AQ9H1J1 476 aaKnown RBP8.19□□□□□ -1.1
CHD6-209ENST00000482596 CLEC1BQ9P126 229 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 CHMP3Q9Y3E7 222 aa8.19□□□□□ -1.1
CHD6-209ENST00000482596 USP15Q9Y4E8 981 aaPredicted RBP8.19□□□□□ -1.1
CHD6-209ENST00000482596 TRIP12Q14669 1992 aaPredicted RBP8.19□□□□□ -1.1
CHD6-209ENST00000482596 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 NCK2O43639 380 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 BAIAP3O94812 1187 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 CSPG5O95196 566 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 SP100P23497 879 aaPredicted RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 GJA9P57773 515 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 ADAM15Q13444 863 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 N4BP2L1Q5TBK1 243 aaPredicted RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 UNQ6494/PRO21346Q6UXR6 183 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 KDF1Q8NAX2 398 aaPredicted RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 MTRQ99707 1265 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 PRR14Q9BWN1 585 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 SPATC1LQ9H0A9 340 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 MFSD1Q9H3U5 465 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 TRMT13Q9NUP7 481 aaKnown RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 BABAM1Q9NWV8 329 aa8.18□□□□□ -1.1
CHD6-209ENST00000482596 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
CHD6-209ENST00000482596 TEX15Q9BXT5 2789 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 ADAMTS20P59510 1910 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 GDF11O95390 407 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 SNAI1O95863 264 aaPredicted RBP8.17□□□□□ -1.1
CHD6-209ENST00000482596 IQCF3P0C7M6 154 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 AOC1P19801 751 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 PTGS1P23219 599 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 NDUFV1P49821 464 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 FOXO4P98177 505 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 LMNB2Q03252 620 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
CHD6-209ENST00000482596 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 ALDH8A1Q9H2A2 487 aaPredicted RBP8.17□□□□□ -1.1
CHD6-209ENST00000482596 IL21Q9HBE4 155 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 NCDNQ9UBB6 729 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 CNPY2Q9Y2B0 182 aa8.17□□□□□ -1.1
CHD6-209ENST00000482596 PI4KAP2A4QPH2 592 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 ASTN1O14525 1302 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 ASNSP08243 561 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 HOXB7P09629 217 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 NPR3P17342 541 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 VCAM1P19320 739 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 NCLP19338 710 aaKnown RBP8.16□□□□□ -1.1
CHD6-209ENST00000482596 TGM1P22735 817 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 RFC2P35250 354 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 ZNF792Q3KQV3 632 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 CAVIN4Q5BKX8 364 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 DUSP27Q5VZP5 1158 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 ABRAQ8N0Z2 381 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 PI4KAP1Q8N8J0 262 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 C12orf42Q96LP6 360 aa8.16□□□□□ -1.1
CHD6-209ENST00000482596 BBC3Q96PG8 261 aaPredicted RBP8.16□□□□□ -1.1
CHD6-209ENST00000482596 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
CHD6-209ENST00000482596 MICAL3Q7RTP6 2002 aa8.15□□□□□ -1.1
CHD6-209ENST00000482596 CHL1O00533 1208 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms