RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 MICU3Q86XE3 530 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 TRIM22Q8IYM9 498 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 TNS4Q8IZW8 715 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 ANKRD35Q8N283 1001 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 NSUN6Q8TEA1 469 aaKnown RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 GTF3C6Q969F1 213 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 EMID1Q96A84 441 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 DDX11Q96FC9 970 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 ABHD8Q96I13 439 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 CDHR1Q96JP9 859 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 FGD4Q96M96 766 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 AGBL1Q96MI9 1066 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 SENP2Q9HC62 589 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 RAVER2Q9HCJ3 691 aaKnown RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 HMX1Q9NP08 348 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 GPCPD1Q9NPB8 672 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 TSKSQ9UJT2 592 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 OGDHLQ9ULD0 1010 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 LIMCH1Q9UPQ0 1083 aa5.87□□□□□ -1.47
HDAC6-223ENST00000480525 FRMPD2Q68DX3 1309 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-223ENST00000480525 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 MYH9P35579 1960 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 LOXHD1Q8IVV2 1947 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 POTEB2H3BUK9 544 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 MEIS2O14770 477 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 RAD21O60216 631 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 PPP1R11O60927 126 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 COBLO75128 1261 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 DUSP11O75319 330 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 EIF3JO75822 258 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 SEC24BO95487 1268 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 INHAP05111 366 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 GOLGA8HP0CJ92 632 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 ALAS1P13196 640 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 AKR1A1P14550 325 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 XBP1P17861 261 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CALML3P27482 149 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CDC27P30260 824 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 ICAM3P32942 547 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 SLC16A2P36021 539 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 ALDH5A1P51649 535 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 NEK4P51957 841 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 AK2P54819 239 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 ORC2Q13416 577 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 COL9A3Q14050 684 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 PCNX4Q63HM2 1172 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 IQSEC1Q6DN90 963 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CHST3Q7LGC8 479 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 NIPA1Q7RTP0 329 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CPXCR1Q8N123 301 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 NUP133Q8WUM0 1156 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CRYGNQ8WXF5 182 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CUL5Q93034 780 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 SNX21Q969T3 373 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 INTS4Q96HW7 963 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 INPP4AQ96PE3 977 aaPredicted RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 PIGSQ96S52 555 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 SENP7Q9BQF6 1050 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 TSEN34Q9BSV6 310 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 UPF3BQ9BZI7 483 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 UBA5Q9GZZ9 404 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 UPF3AQ9H1J1 476 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 EHMT1Q9H9B1 1298 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
HDAC6-223ENST00000480525 RIC8AQ9NPQ8 531 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 GABRQQ9UN88 632 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CNPY2Q9Y2B0 182 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 KIF3AQ9Y496 699 aa5.86□□□□□ -1.47
HDAC6-223ENST00000480525 CEP290O15078 2479 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ASTN1O14525 1302 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 GCOM1H8Y6P7 765 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 M0R2N6 131 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 STXBP3O00186 592 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 NFIBO00712 420 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 CPLX1O14810 134 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 KPNA6O60684 536 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PLEKHA8P1O95397 391 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SGPL1O95470 568 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SNAI1O95863 264 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 CYP3A4P08684 503 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 POLR2MP0CAP2 368 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 HOXD8P13378 290 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PRKAR2AP13861 404 aaKnown RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 CIITAP33076 1130 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ADD1P35611 737 aaKnown RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 AKAP17AQ02040 695 aaKnown RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 CACNB2Q08289 660 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 APOBRQ0VD83 1088 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SCRN1Q12765 414 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 BAATQ14032 418 aaPredicted RBP5.85□□□□□ -1.47
HDAC6-223ENST00000480525 SNX17Q15036 470 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 STXBP2Q15833 593 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 PKN1Q16512 942 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 MUM1L1Q5H9M0 696 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 LHX8Q68G74 356 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 ARMCX2Q7L311 632 aa5.85□□□□□ -1.47
HDAC6-223ENST00000480525 RASGRP2Q7LDG7 609 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms