RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 PDRG1Q9NUG6 133 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 SYNPO2Q9UMS6 1093 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 ATP2A1O14983 1001 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 CTAGE5O15320 804 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 SLC16A2P36021 539 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 ACLYP53396 1101 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 SNAP25P60880 206 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 APOBRQ0VD83 1088 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 SNRNP48Q6IEG0 339 aaKnown RBP10.55□□□□□ -0.72
VCP-206ENST00000480327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
VCP-206ENST00000480327 C16orf59Q7L2K0 433 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 ANKRD33Q7Z3H0 272 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 CATIPQ7Z7H3 387 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 RNF180Q86T96 592 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 MAFAQ8NHW3 353 aaPredicted RBP10.55□□□□□ -0.72
VCP-206ENST00000480327 DCAF4Q8WV16 495 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 BRF1Q92994 677 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 TM6SF1Q9BZW5 370 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 CPVLQ9H3G5 476 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 WDR19Q8NEZ3 1342 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 SYNGAP1Q96PV0 1343 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 SCN5AQ14524 2016 aa10.55□□□□□ -0.72
VCP-206ENST00000480327 KLF18A0A0U1RQI7 1052 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 PARP1P09874 1014 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 PTGS1P23219 599 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 LIFRP42702 1097 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 CDK7P50613 346 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 NEK4P51957 841 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 STAT2P52630 851 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 KCNA10Q16322 511 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 NOL8Q76FK4 1167 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 USP38Q8NB14 1042 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 TSEN34Q9BSV6 310 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 MTA3Q9BTC8 594 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 UBA5Q9GZZ9 404 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
VCP-206ENST00000480327 FEM1BQ9UK73 627 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 ASTN1O14525 1302 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
VCP-206ENST00000480327 DHX16O60231 1041 aaKnown RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 RAG1P15918 1043 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 CST5P28325 142 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 COPB2P35606 906 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 FPGSQ05932 587 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 TROAPQ12815 778 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 TOB2Q14106 344 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 GRM4Q14833 912 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 GRIN2CQ14957 1233 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 RASIP1Q5U651 963 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 SYNE3Q6ZMZ3 975 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 CPXCR1Q8N123 301 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 MSL3Q8N5Y2 521 aaKnown RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 TBC1D32Q96NH3 1257 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 KIF2CQ99661 725 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■□□ 14.9
VCP-206ENST00000480327 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 TMEM39AQ9NV64 488 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 ZHX1Q9UKY1 873 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 FAM184BQ9ULE4 1060 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 CTDP1Q9Y5B0 961 aaPredicted RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 DDX49Q9Y6V7 483 aaKnown RBP10.53□□□□□ -0.72
VCP-206ENST00000480327 ZNF536O15090 1300 aa10.53□□□□□ -0.72
VCP-206ENST00000480327 PTPRSQ13332 1948 aa10.52□□□□□ -0.72
VCP-206ENST00000480327 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.52□□□□□ -0.73
VCP-206ENST00000480327 MOXD2PA6NHM9 499 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 GOLGA8BA8MQT2 603 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 GRXCR1A8MXD5 290 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 DUSP11O75319 330 aaKnown RBP10.52□□□□□ -0.73
VCP-206ENST00000480327 DDAH1O94760 285 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 TIMP1P01033 207 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 ASGR1P07306 291 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 FOSL2P15408 326 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 DNAJB2P25686 324 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 PBX2P40425 430 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 AK2P54819 239 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 CNTN2Q02246 1040 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 STK3Q13188 491 aa10.52□□□□□ -0.73
VCP-206ENST00000480327 ACVR2BQ13705 512 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms