RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 LTBP3Q9NS15 1303 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 K7ESM1 405 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 PPP1R11O60927 126 aaPredicted RBP6.06□□□□□ -1.44
CMSS1-204ENST00000479555 ITGA4P13612 1032 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 L1CAMP32004 1257 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 ITGAEP38570 1179 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 CAP1Q01518 475 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 DPY19L1Q2PZI1 675 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 CCDC81Q6ZN84 652 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 TMEM87AQ8NBN3 555 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 RGS22Q8NE09 1264 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 SMARCC2Q8TAQ2 1214 aa6.06□□□□□ -1.44
CMSS1-204ENST00000479555 NOBOXO60393 691 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 VAMP4O75379 141 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 NCAM1P13591 858 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 NOP2P46087 812 aaKnown RBP6.05□□□□□ -1.44
CMSS1-204ENST00000479555 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 ZFYVE27Q5T4F4 411 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 B3GNT8Q7Z7M8 397 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 CPNE8Q86YQ8 564 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 CARFQ8N187 725 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 SMARCC1Q92922 1105 aaPredicted RBP6.05□□□□□ -1.44
CMSS1-204ENST00000479555 TM9SF2Q99805 663 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 GULP1Q9UBP9 304 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
CMSS1-204ENST00000479555 SH3D21A4FU49 640 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 TBC1D8O95759 1140 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 GUCY2CP25092 1073 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 POU4F1Q01851 419 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 SMAD4Q13485 552 aaKnown RBP6.04□□□□□ -1.44
CMSS1-204ENST00000479555 TAB3Q8N5C8 712 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-204ENST00000479555 FGD4Q96M96 766 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 RNF38Q9H0F5 515 aa6.04□□□□□ -1.44
CMSS1-204ENST00000479555 SPATA6Q9NWH7 488 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-204ENST00000479555 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
CMSS1-204ENST00000479555 SF3B6Q9Y3B4 125 aaKnown RBP6.04□□□□□ -1.44
CMSS1-204ENST00000479555 CENPBP07199 599 aaPredicted RBP6.03□□□□□ -1.44
CMSS1-204ENST00000479555 CORO7P57737 925 aa6.03□□□□□ -1.44
CMSS1-204ENST00000479555 DDX11Q96FC9 970 aa6.03□□□□□ -1.44
CMSS1-204ENST00000479555 GPR20Q99678 358 aa6.03□□□□□ -1.44
CMSS1-204ENST00000479555 HAUS7Q99871 368 aa6.03□□□□□ -1.44
CMSS1-204ENST00000479555 IMPDH2P12268 514 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 GJA9P57773 515 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 ZNF827Q17R98 1081 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 ZNF326Q5BKZ1 582 aaKnown RBP6.02□□□□□ -1.45
CMSS1-204ENST00000479555 LZTR1Q8N653 840 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 ZBTB8AQ96BR9 441 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 BORCS6Q96GS4 357 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 LNPKQ9C0E8 428 aa6.02□□□□□ -1.45
CMSS1-204ENST00000479555 AURKAO14965 403 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 ZNF76P36508 570 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 RCSD1Q6JBY9 416 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 ZNF761Q86XN6 746 aaPredicted RBP6.01□□□□□ -1.45
CMSS1-204ENST00000479555 NLGN2Q8NFZ4 835 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 TSPAN17Q96FV3 270 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 MTA3Q9BTC8 594 aa6.01□□□□□ -1.45
CMSS1-204ENST00000479555 EPHX1P07099 455 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 C8BP07358 591 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 MAGEA10P43363 369 aaPredicted RBP6□□□□□ -1.45
CMSS1-204ENST00000479555 SARSP49591 514 aaKnown RBP6□□□□□ -1.45
CMSS1-204ENST00000479555 ADAM17P78536 824 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 TCEAL1Q15170 157 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 GNPTABQ3T906 1256 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 EEF1DP3Q658K8 133 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 STK32CQ86UX6 486 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 CABP7Q86V35 215 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 KLHL25Q9H0H3 589 aa6□□□□□ -1.45
CMSS1-204ENST00000479555 ITGB3P05106 788 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 RACK1P63244 317 aaKnown RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 FANCCQ00597 558 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 CACNB2Q08289 660 aaPredicted RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 MBLAC2Q68D91 279 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 ADAT2Q7Z6V5 191 aaKnown RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 FAM26EQ8N5C1 309 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 RBBP8NLQ8NC74 664 aaPredicted RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 GORASP1Q9BQQ3 440 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 BACH2Q9BYV9 841 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 GINM1Q9NU53 330 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 SMPD4Q9NXE4 827 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 WHRNQ9P202 907 aa5.99□□□□□ -1.45
CMSS1-204ENST00000479555 CGGBP1Q9UFW8 167 aaPredicted RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 DIS3Q9Y2L1 958 aaKnown RBP5.99□□□□□ -1.45
CMSS1-204ENST00000479555 C2orf71A6NGG8 1288 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 NTRK1P04629 796 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 TNFRSF1AP19438 455 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 SEPHS1P49903 392 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 HEATR6Q6AI08 1181 aaKnown RBP5.98□□□□□ -1.45
CMSS1-204ENST00000479555 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 NETO2Q8NC67 525 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 ADAMTS17Q8TE56 1095 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 USP33Q8TEY7 942 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 PEX11GQ96HA9 241 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 RBM15Q96T37 977 aaKnown RBP eCLIP5.98□□□□□ -1.45
CMSS1-204ENST00000479555 NTMQ9P121 344 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 PALD1Q9ULE6 856 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 MYRFQ9Y2G1 1151 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 BACE2Q9Y5Z0 518 aa5.98□□□□□ -1.45
CMSS1-204ENST00000479555 A0A087WZG4 1122 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms