RNA–Protein interactions for RNA: ENST00000479052.5

CCNL1-221, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-221ENST00000479052 LCNL1Q6ZST4 164 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 SMIM5Q71RC9 77 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 SND1Q7KZF4 910 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCNL1-221ENST00000479052 ZSWIM9Q86XI8 627 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 MFSD2AQ8NA29 543 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 BHLHE22Q8NFJ8 381 aaPredicted RBP4.34□□□□□ -1.71
CCNL1-221ENST00000479052 NSD3Q9BZ95 1437 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 USP54Q70EL1 1684 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 RGPD5Q99666 1765 aa4.34□□□□□ -1.71
CCNL1-221ENST00000479052 TOGARAM1Q9Y4F4 1720 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 UPK3BL1B0FP48 263 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 UPK3BL2E5RIL1 263 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 HMGB2P26583 209 aaKnown RBP4.33□□□□□ -1.72
CCNL1-221ENST00000479052 DAB2P98082 770 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 TNK2Q07912 1038 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 PKN1Q16512 942 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 C9orf131Q5VYM1 1079 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 C22orf34Q6ZV56 151 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 MFSD4AQ8N468 514 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 SMC1BQ8NDV3 1235 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 IP6K1Q92551 441 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 UBE2FQ969M7 185 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 ACSF2Q96CM8 615 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-221ENST00000479052 Q96M66 194 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 ZSWIM5Q9P217 1185 aa4.33□□□□□ -1.72
CCNL1-221ENST00000479052 CD163L1Q9NR16 1453 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 KDM6AO15550 1401 aaPredicted RBP4.32□□□□□ -1.72
CCNL1-221ENST00000479052 SBNO2Q9Y2G9 1366 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 CENPJQ9HC77 1338 aaPredicted RBP4.32□□□□□ -1.72
CCNL1-221ENST00000479052 A0A0G2JLW4 131 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 FOXN1O15353 648 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 DPEP1P16444 411 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 KCNMB1Q16558 191 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 BNC2Q6ZN30 1099 aaPredicted RBP4.32□□□□□ -1.72
CCNL1-221ENST00000479052 PRR23BQ6ZRT6 265 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 FBXO33Q7Z6M2 555 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 MRPL41Q8IXM3 137 aaKnown RBP4.32□□□□□ -1.72
CCNL1-221ENST00000479052 PHC3Q8NDX5 983 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
CCNL1-221ENST00000479052 PPP1R13LQ8WUF5 828 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 TMEM87BQ96K49 555 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 SLC38A3Q99624 504 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 MIR1-1HGQ9H1L0 117 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 KCNK12Q9HB15 430 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 LMCD1Q9NZU5 365 aa4.32□□□□□ -1.72
CCNL1-221ENST00000479052 KCPQ6ZWJ8 1503 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 USP47Q96K76 1375 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 PLEKHG2Q9H7P9 1386 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 KIF13BQ9NQT8 1826 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 LRRN2O75325 713 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 ESR1P03372 595 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 LMNB1P20700 586 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 ERVFC1P60507 584 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 PSMD2Q13200 908 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 TAF1CQ15572 869 aaPredicted RBP4.31□□□□□ -1.72
CCNL1-221ENST00000479052 LINC00116Q8NCU8 138 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 DNAJB8Q8NHS0 232 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 FAM53CQ9NYF3 392 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 FAM208AQ9UK61 1670 aaKnown RBP4.31□□□□□ -1.72
CCNL1-221ENST00000479052 MEGF6O75095 1541 aa4.31□□□□□ -1.72
CCNL1-221ENST00000479052 PALLDQ8WX93 1383 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 KIAA1210Q9ULL0 1709 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 KDM2BQ8NHM5 1336 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 DNAJC25-GNG10A0A024R161 153 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 GLTPD2A6NH11 291 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 TSPAN15O95858 294 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 F13A1P00488 732 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 PF4P02776 101 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 MMP10P09238 476 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 RAP1GAPP47736 663 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 RPL6Q02878 288 aaKnown RBP4.3□□□□□ -1.72
CCNL1-221ENST00000479052 ITPK1Q13572 414 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 TSNAXIP1Q2TAA8 658 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 RALGPS1Q5JS13 557 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 NBPF6Q5VWK0 638 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 SLC6A19Q695T7 634 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 TMC4Q7Z404 712 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 NME9Q86XW9 330 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 MCATQ8IVS2 390 aaKnown RBP4.3□□□□□ -1.72
CCNL1-221ENST00000479052 SYTL4Q96C24 671 aaPredicted RBP4.3□□□□□ -1.72
CCNL1-221ENST00000479052 ABHD8Q96I13 439 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 NBPF4Q96M43 638 aa4.3□□□□□ -1.72
CCNL1-221ENST00000479052 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
CCNL1-221ENST00000479052 C4BP0C0L5 1744 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 KTN1Q86UP2 1357 aaKnown RBP4.29□□□□□ -1.72
CCNL1-221ENST00000479052 C5P01031 1676 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 CGNL1Q0VF96 1302 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 EVC2Q86UK5 1308 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 PASKQ96RG2 1323 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 FAM221AA4D161 298 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 PATL2C9JE40 543 aaKnown RBP4.29□□□□□ -1.72
CCNL1-221ENST00000479052 CYP27B1O15528 508 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 CILPO75339 1184 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 GLI1P08151 1106 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 C1QTNF9P0C862 333 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 GYS1P13807 737 aa4.29□□□□□ -1.72
CCNL1-221ENST00000479052 VEGFAP15692 232 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms