RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 MROH7Q68CQ1 1323 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.21
VARS2-208ENST00000477052 B4GALT4O60513 344 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 KDM4AO75164 1064 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 DNAJB2P25686 324 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 NKX3-2P78367 333 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 NUCB1Q02818 461 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 TBC1D5Q92609 795 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 COPS5Q92905 334 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
VARS2-208ENST00000477052 WDR11Q9BZH6 1224 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 VTA1Q9NP79 307 aa13.71□□□□□ -0.21
VARS2-208ENST00000477052 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.7□□□□□ -0.22
VARS2-208ENST00000477052 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.7□□□□□ -0.22
VARS2-208ENST00000477052 B4E1Z4 1266 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 ZNF213O14771 459 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 MYL3P08590 195 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 FOSL2P15408 326 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 RPS6P62753 249 aaKnown RBP13.7□□□□□ -0.22
VARS2-208ENST00000477052 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.225e-9■■■□□ 17.9
VARS2-208ENST00000477052 RNF207Q6ZRF8 634 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 IL25Q9H293 177 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 HIPK3Q9H422 1215 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
VARS2-208ENST00000477052 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
VARS2-208ENST00000477052 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 CYP2C9P11712 490 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 DUSP28Q4G0W2 176 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 OTOP2Q7RTS6 562 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 OR6J1Q8NGC5 347 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 ESR2Q92731 530 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 SCLYQ96I15 445 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
VARS2-208ENST00000477052 TRMT13Q9NUP7 481 aaKnown RBP13.69□□□□□ -0.22
VARS2-208ENST00000477052 ADD3Q9UEY8 706 aaKnown RBP13.69□□□□□ -0.22
VARS2-208ENST00000477052 ZEB2O60315 1214 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 CABYRO75952 493 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 PDE4DQ08499 809 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 PNMA1Q8ND90 353 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 TTC14Q96N46 770 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 NOC4LQ9BVI4 516 aaKnown RBP13.68□□□□□ -0.22
VARS2-208ENST00000477052 PBX4Q9BYU1 374 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 WNT8AQ9H1J5 351 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 OSBPL3Q9H4L5 887 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 RNF41Q9H4P4 317 aaPredicted RBP13.68□□□□□ -0.22
VARS2-208ENST00000477052 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 IL23AQ9NPF7 189 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 ZSWIM5Q9P217 1185 aa13.68□□□□□ -0.22
VARS2-208ENST00000477052 ARIH2O95376 493 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 PDE4AP27815 886 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 CDC37Q16543 378 aaPredicted RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 RASIP1Q5U651 963 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 ADGRF4Q8IZF3 695 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 ENAHQ8N8S7 591 aaPredicted RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 PPM1EQ8WY54 764 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 ALDH8A1Q9H2A2 487 aaPredicted RBP13.67□□□□□ -0.22
VARS2-208ENST00000477052 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 PRDM6Q9NQX0 595 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 COL20A1Q9P218 1284 aa13.67□□□□□ -0.22
VARS2-208ENST00000477052 RBM47A0AV96 593 aaKnown RBP13.66□□□□□ -0.22
VARS2-208ENST00000477052 FGBP02675 491 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 RABGGTBP53611 331 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
VARS2-208ENST00000477052 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 DGKHQ86XP1 1220 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 PRDM12Q9H4Q4 367 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 Q9Y3F1 56 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
VARS2-208ENST00000477052 TNKSO95271 1327 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 WDR19Q8NEZ3 1342 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 TXNP10599 105 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 MYOGP15173 224 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 EDNRBP24530 442 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 PPP2R5BQ15173 497 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 NBPF20Q3BBV1 942 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 GPATCH4Q5T3I0 446 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 SEPT14Q6ZU15 432 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 IQCA1Q86XH1 822 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms