RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 ANKRD7Q92527 254 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GFM2Q969S9 779 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SH3GL3Q99963 347 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 TUBB6Q9BUF5 446 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SENP2Q9HC62 589 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 KRT3P12035 628 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GFAPP14136 432 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 DTHD1Q6ZMT9 781 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC197Q8NCU1 140 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC124Q96CT7 223 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 DTNBP1Q96EV8 351 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 NLRP3Q96P20 1036 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 AATFQ9NY61 560 aaKnown RBP eCLIP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 ASIC3Q9UHC3 531 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 NEDD4P46934 1319 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SPATA31A3Q5VYP0 1347 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 GJC1P36383 396 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 LCA5Q86VQ0 697 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 NBPF5PQ86XG9 351 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CRACR2BQ8N4Y2 399 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 PPP4R1Q8TF05 950 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 EEF2KMTQ96G04 330 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 SLF1Q9BQI6 1058 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 PPP1R1BQ9UD71 204 aaPredicted RBP6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 HPS5Q9UPZ3 1129 aa6.7□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC169A6NNP5 214 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TMEM110-MUSTN1A8MSY1 372 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ARHGEF9O43307 516 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SEC31AO94979 1220 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TSPY3P0CV98 308 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TSPY8P0CW00 308 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CASP1P29466 404 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PTGDRQ13258 359 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 NBPF9Q3BBW0 867 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TRIM60Q495X7 471 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RESP18Q5W5W9 173 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ST13P4Q8IZP2 240 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 MAK16Q9BXY0 300 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 FOXP1Q9H334 677 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TFCP2L1Q9NZI6 479 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RIMBP3CA6NJZ7 1639 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RIMBP3BA6NNM3 1639 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RIMBP3Q9UFD9 1639 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CYP2D7A0A087X1C5 515 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 FAM13AO94988 1023 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CTNNA1P35221 906 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CLCN6P51797 869 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PARP10Q53GL7 1025 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TMCO4Q5TGY1 634 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 KRT79Q5XKE5 535 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ARHGAP18Q8N392 663 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ARMC2Q8NEN0 867 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SYMPKQ92797 1274 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 KIFAP3Q92845 792 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SPDL1Q96EA4 605 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 EFHD1Q9BUP0 239 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RABEP2Q9H5N1 569 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 BAG5Q9UL15 447 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 MRFAP1Q9Y605 127 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SAR1BQ9Y6B6 198 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 E9PMD0 336 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ZSCAN20P17040 1043 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 MAGEA9P43362 315 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PLCD1P51178 756 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RBM5P52756 815 aaKnown RBP eCLIP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CASP7P55210 303 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PPP2R5BQ15173 497 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TAF11Q15544 211 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RABGGTAQ92696 567 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 LY9Q9HBG7 655 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 UBN2Q6ZU65 1347 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 COL15A1P39059 1388 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 STK10O94804 968 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 LDHCP07864 332 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CDC25AP30304 524 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 GUCY1A2P33402 732 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 MAGEA1P43355 309 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CCT5P48643 541 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 NOP14P78316 857 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 CHRNDQ07001 517 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TRIM28Q13263 835 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SEPT2Q15019 361 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 RBM26Q5T8P6 1007 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 SPATA1Q5VX52 437 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 GRAMD4Q6IC98 578 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ZNF449Q6P9G9 518 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 TRIML1Q8N9V2 468 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ENOX1Q8TC92 643 aaKnown RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 ZSCAN10Q96SZ4 725 aaPredicted RBP6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 BPIFA3Q9BQP9 254 aa6.69□□□□□ -1.34
HNRNPU-208ENST00000475997 UBE2Q2LH0YL09 131 aa6.68□□□□□ -1.34
HNRNPU-208ENST00000475997 HGSO14964 777 aaPredicted RBP6.68□□□□□ -1.34
HNRNPU-208ENST00000475997 TTC4O95801 387 aa6.68□□□□□ -1.34
HNRNPU-208ENST00000475997 BAG3O95817 575 aa6.68□□□□□ -1.34
HNRNPU-208ENST00000475997 RPSAP08865 295 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms