RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 hCG_1984214I3L0E3 225 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 CNTN2Q02246 1040 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 TRIM32Q13049 653 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 RNF207Q6ZRF8 634 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 ZNF713Q8N859 430 aaPredicted RBP19.59■□□□□ 0.73
SCAF11-206ENST00000474828 DNERQ8NFT8 737 aa19.59■□□□□ 0.73
SCAF11-206ENST00000474828 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
SCAF11-206ENST00000474828 RBM27Q9P2N5 1060 aaKnown RBP19.59■□□□□ 0.73
SCAF11-206ENST00000474828 PIK3CDO00329 1044 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 PRPF3O43395 683 aaKnown RBP19.58■□□□□ 0.72
SCAF11-206ENST00000474828 CYBAP13498 195 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 EDNRBP24530 442 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 RABEP1Q15276 862 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 MTFR1Q15390 333 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 MFSD14CQ5VZR4 134 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 SLC30A10Q6XR72 485 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 SYTL5Q8TDW5 730 aaPredicted RBP19.58■□□□□ 0.72
SCAF11-206ENST00000474828 TBC1D5Q92609 795 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.72
SCAF11-206ENST00000474828 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
SCAF11-206ENST00000474828 SEC63Q9UGP8 760 aaKnown RBP19.58■□□□□ 0.72
SCAF11-206ENST00000474828 BAZ2BQ9UIF8 2168 aaKnown RBP19.58■□□□□ 0.72
SCAF11-206ENST00000474828 MYH6P13533 1939 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 SNAI1O95863 264 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-206ENST00000474828 GJB1P08034 283 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 CCL5P13501 91 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 PRKAR2AP13861 404 aaKnown RBP19.57■□□□□ 0.72
SCAF11-206ENST00000474828 KCNA4P22459 653 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 CYP2C19P33261 490 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 PKN1Q16512 942 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-206ENST00000474828 PPP1R18Q6NYC8 613 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 NSMFQ6X4W1 530 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 TRPV1Q8NER1 839 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 COL20A1Q9P218 1284 aa19.57■□□□□ 0.72
SCAF11-206ENST00000474828 V9GY48 417 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-206ENST00000474828 SCRN1Q12765 414 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 ME3Q16798 604 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 CCDC82Q8N4S0 544 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 UNC93B1Q9H1C4 597 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 NCOA5Q9HCD5 579 aaKnown RBP19.56■□□□□ 0.72
SCAF11-206ENST00000474828 BARHL2Q9NY43 387 aa19.56■□□□□ 0.72
SCAF11-206ENST00000474828 ADD3Q9UEY8 706 aaKnown RBP19.56■□□□□ 0.72
SCAF11-206ENST00000474828 FRMPD4Q14CM0 1322 aa19.55■□□□□ 0.72
SCAF11-206ENST00000474828 ASB14A6NK59 587 aa19.55■□□□□ 0.72
SCAF11-206ENST00000474828 ZNF865P0CJ78 1059 aaPredicted RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 CCT2P78371 535 aaKnown RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 WWC2Q6AWC2 1192 aa19.55■□□□□ 0.72
SCAF11-206ENST00000474828 TYW1BQ6NUM6 668 aa19.55■□□□□ 0.72
SCAF11-206ENST00000474828 FAM177A1Q8N128 213 aaPredicted RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 PURBQ96QR8 312 aaKnown RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 HMX1Q9NP08 348 aaPredicted RBP19.55■□□□□ 0.72
SCAF11-206ENST00000474828 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 MEIS2O14770 477 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 GJA8P48165 433 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 ALDH5A1P51649 535 aaPredicted RBP19.54■□□□□ 0.72
SCAF11-206ENST00000474828 LHX8Q68G74 356 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 ARMCX2Q7L311 632 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 GTF3C6Q969F1 213 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 ABHD16BQ9H3Z7 469 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 BIN2Q9UBW5 565 aaPredicted RBP19.54■□□□□ 0.72
SCAF11-206ENST00000474828 NAP1L2Q9ULW6 460 aaPredicted RBP19.54■□□□□ 0.72
SCAF11-206ENST00000474828 LIMCH1Q9UPQ0 1083 aa19.54■□□□□ 0.72
SCAF11-206ENST00000474828 hCG_1642624A0A1W2PR95 340 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 ESYT2A0FGR8 921 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 STXBP3O00186 592 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 LARGE1O95461 756 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 CTDNEP1O95476 244 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 SCG2P13521 617 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 CALML3P27482 149 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 IWS1Q96ST2 819 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 RNF208Q9H0X6 261 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 SLKQ9H2G2 1235 aaPredicted RBP19.53■□□□□ 0.72
SCAF11-206ENST00000474828 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.53■□□□□ 0.72
SCAF11-206ENST00000474828 LRRC37A2A6NM11 1700 aa19.53■□□□□ 0.72
SCAF11-206ENST00000474828 STK36Q9NRP7 1315 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
SCAF11-206ENST00000474828 SEPT4O43236 478 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 CCND3P30281 292 aaPredicted RBP19.52■□□□□ 0.72
SCAF11-206ENST00000474828 ST3GAL1Q11201 340 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 NSUN6Q8TEA1 469 aaKnown RBP19.52■□□□□ 0.72
SCAF11-206ENST00000474828 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 PHKBQ93100 1093 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 TAAR1Q96RJ0 339 aa19.52■□□□□ 0.72
SCAF11-206ENST00000474828 RBM47A0AV96 593 aaKnown RBP19.51■□□□□ 0.71
SCAF11-206ENST00000474828 MSCO60682 206 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 SLC34A2O95436 690 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 SGPL1O95470 568 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 CFBP00751 764 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 NKX3-2P78367 333 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 ACVR2BQ13705 512 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 CPLX2Q6PUV4 134 aaKnown RBP19.51■□□□□ 0.71
SCAF11-206ENST00000474828 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
SCAF11-206ENST00000474828 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
SCAF11-206ENST00000474828 ZSCAN31Q96LW9 406 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms