RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 SUPT20HL2P0C7V6 817 aa20.65■□□□□ 0.9
CUL4A-208ENST00000474116 PURAQ00577 322 aaKnown RBP20.65■□□□□ 0.9
CUL4A-208ENST00000474116 IKQ13123 557 aaPredicted RBP20.65■□□□□ 0.9
CUL4A-208ENST00000474116 KCTD1Q719H9 257 aa20.65■□□□□ 0.9
CUL4A-208ENST00000474116 CHMP4BQ9H444 224 aaKnown RBP20.65■□□□□ 0.9
CUL4A-208ENST00000474116 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
CUL4A-208ENST00000474116 DEFB128Q7Z7B8 93 aa20.64■□□□□ 0.89
CUL4A-208ENST00000474116 CERS4Q9HA82 394 aa20.64■□□□□ 0.89
CUL4A-208ENST00000474116 IL17RBQ9NRM6 502 aa20.64■□□□□ 0.89
CUL4A-208ENST00000474116 POLR3EQ9NVU0 708 aa20.64■□□□□ 0.89
CUL4A-208ENST00000474116 RBM47A0AV96 593 aaKnown RBP20.63■□□□□ 0.89
CUL4A-208ENST00000474116 TLL1O43897 1013 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 PPARAQ07869 468 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 SKIV2LQ15477 1246 aaKnown RBP20.63■□□□□ 0.89
CUL4A-208ENST00000474116 KRT40Q6A162 431 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 NSMFQ6X4W1 530 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 PHOSPHO2Q8TCD6 241 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
CUL4A-208ENST00000474116 NACAP1Q9BZK3 213 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 EPHX3Q9H6B9 360 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 CCPG1Q9ULG6 757 aa20.63■□□□□ 0.89
CUL4A-208ENST00000474116 PRRC2BQ5JSZ5 2229 aaKnown RBP20.63■□□□□ 0.89
CUL4A-208ENST00000474116 GTPBP6O43824 516 aaPredicted RBP20.62■□□□□ 0.89
CUL4A-208ENST00000474116 ARHGEF15O94989 841 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
CUL4A-208ENST00000474116 RFC2P35250 354 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 TAP1Q03518 808 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 RASGRP2Q7LDG7 609 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 SLC9A7Q96T83 725 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 WDR11Q9BZH6 1224 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 COG5Q9UP83 839 aa20.62■□□□□ 0.89
CUL4A-208ENST00000474116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
CUL4A-208ENST00000474116 ICAM1P05362 532 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 SLC3A2P08195 630 aaKnown RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 ACTN1P12814 892 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 NOVP48745 357 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 CPT1AP50416 773 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 ALDH5A1P51649 535 aaPredicted RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 BAATQ14032 418 aaPredicted RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 MTG1Q9BT17 334 aaPredicted RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 LRFN3Q9BTN0 628 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 STX8Q9UNK0 236 aa20.61■□□□□ 0.89
CUL4A-208ENST00000474116 ARIH1Q9Y4X5 557 aaPredicted RBP20.61■□□□□ 0.89
CUL4A-208ENST00000474116 SCN10AQ9Y5Y9 1956 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 LOC102724159A0A0B4J2E5 919 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 NMT2O60551 498 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 MYL3P08590 195 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 IQCF3P0C7M6 154 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 PWP2Q15269 919 aaKnown RBP20.6■□□□□ 0.89
CUL4A-208ENST00000474116 NBPF20Q3BBV1 942 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 HERC6Q8IVU3 1022 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 NAPBQ9H115 298 aa20.6■□□□□ 0.89
CUL4A-208ENST00000474116 ADD3Q9UEY8 706 aaKnown RBP20.6■□□□□ 0.89
CUL4A-208ENST00000474116 PITPNM1O00562 1244 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 FOXP2O15409 715 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 NFRKBQ6P4R8 1299 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 OR6J1Q8NGC5 347 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 ARNTL2Q8WYA1 636 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 DCTPP1Q9H773 170 aa20.59■□□□□ 0.89
CUL4A-208ENST00000474116 NFIBO00712 420 aa20.58■□□□□ 0.89
CUL4A-208ENST00000474116 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.89
CUL4A-208ENST00000474116 TTBK2Q6IQ55 1244 aa20.58■□□□□ 0.89
CUL4A-208ENST00000474116 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.89
CUL4A-208ENST00000474116 PPP1R13LQ8WUF5 828 aa20.58■□□□□ 0.89
CUL4A-208ENST00000474116 GPHNQ9NQX3 736 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-208ENST00000474116 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
CUL4A-208ENST00000474116 A6NJR5 290 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 TSPY2A6NKD2 308 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 LPXNO60711 386 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 GRB10Q13322 594 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 ZMYM1Q5SVZ6 1142 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 DCAF4Q8WV16 495 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 CLEC4DQ8WXI8 215 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 HLA-CQ95604 372 aa20.57■□□□□ 0.88
CUL4A-208ENST00000474116 KPNA6O60684 536 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 SLC16A2P36021 539 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 CTDSPL2Q05D32 466 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 PTPN11Q06124 597 aaPredicted RBP20.56■□□□□ 0.88
CUL4A-208ENST00000474116 C20orf194Q5TEA3 1177 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 SPRED2Q7Z698 418 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 RETREG2Q8NC44 543 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 KHSRPQ92945 711 aaKnown RBP eCLIP20.56■□□□□ 0.885e-7■■■■□ 20.3
CUL4A-208ENST00000474116 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.88
CUL4A-208ENST00000474116 PTPRSQ13332 1948 aa20.56■□□□□ 0.88
CUL4A-208ENST00000474116 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
CUL4A-208ENST00000474116 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
CUL4A-208ENST00000474116 EDNRBP24530 442 aa20.55■□□□□ 0.88
CUL4A-208ENST00000474116 SLC30A10Q6XR72 485 aa20.55■□□□□ 0.88
CUL4A-208ENST00000474116 TET1Q8NFU7 2136 aa20.55■□□□□ 0.88
CUL4A-208ENST00000474116 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
CUL4A-208ENST00000474116 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
CUL4A-208ENST00000474116 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
CUL4A-208ENST00000474116 BFSP2Q13515 415 aa20.54■□□□□ 0.88
CUL4A-208ENST00000474116 GPNMBQ14956 572 aa20.54■□□□□ 0.88
CUL4A-208ENST00000474116 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms