RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PARD6AQ9NPB6 346 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 PIEZO2Q9H5I5 2752 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 ATG2AQ2TAZ0 1938 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 ZNFX1Q9P2E3 1918 aaKnown RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 GPR75-ASB3A0A0A6YYF3 556 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 STK25O00506 426 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 GLP2RO95838 553 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 TMPOP42166 694 aaKnown RBP8.21□□□□□ -1.1
HDAC3-206ENST00000471968 PUM3Q15397 648 aaKnown RBP8.21□□□□□ -1.1
HDAC3-206ENST00000471968 CCDC30Q5VVM6 783 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 ADGRD2Q7Z7M1 963 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 RBM23Q86U06 439 aaKnown RBP8.21□□□□□ -1.1
HDAC3-206ENST00000471968 C11orf84Q9BUA3 381 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-206ENST00000471968 ABCF2Q9UG63 623 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 MYH13Q9UKX3 1938 aa8.21□□□□□ -1.1
HDAC3-206ENST00000471968 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 E9PSI1 815 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 NBNO60934 754 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 FLOT1O75955 427 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 AMHP03971 560 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 NRIP1P48552 1158 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 SPECC1Q5M775 1068 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 TEX11Q8IYF3 940 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 SIX5Q8N196 739 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 ZCCHC14Q8WYQ9 949 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 DDX1Q92499 740 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 DDX11Q96FC9 970 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 BBC3Q96PG8 261 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 ERVK-5Q9HDB9 667 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 SMG5Q9UPR3 1016 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 GNEQ9Y223 722 aaKnown RBP8.2□□□□□ -1.1
HDAC3-206ENST00000471968 NR2E1Q9Y466 385 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 AKAP13Q12802 2813 aa8.2□□□□□ -1.1
HDAC3-206ENST00000471968 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 C2CD4DB7Z1M9 353 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 CXCL10P02778 98 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 MMP1P03956 469 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 FGFR2P21802 821 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 MCAMP43121 646 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
HDAC3-206ENST00000471968 LRRC8DQ7L1W4 858 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 ARMCX2Q7L311 632 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 PDZD3Q86UT5 571 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 RIOX2Q8IUF8 465 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 FOXP4Q8IVH2 680 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-206ENST00000471968 LINS1Q8NG48 757 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 AFAP1L1Q8TED9 768 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 PIK3R5Q8WYR1 880 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 FBXL21Q9UKT6 434 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 SPTA1P02549 2419 aa8.19□□□□□ -1.1
HDAC3-206ENST00000471968 C5orf67F2Z3F1 127 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 SPTLC1O15269 473 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 UPP2O95045 317 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 RB1P06400 928 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 SELPP16109 830 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 RFX1P22670 979 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 SPEM2Q0P670 501 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 CAMK1Q14012 370 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 G2E3Q7L622 706 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 ZNF467Q7Z7K2 595 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-206ENST00000471968 METTL16Q86W50 562 aaKnown RBP8.18□□□□□ -1.1
HDAC3-206ENST00000471968 C1orf210Q8IVY1 113 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 TMEM121BQ9BXQ6 578 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-206ENST00000471968 KATNBL1Q9H079 304 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 GNL3LQ9NVN8 582 aaKnown RBP8.18□□□□□ -1.1
HDAC3-206ENST00000471968 DENND2AQ9ULE3 1009 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 FANCMQ8IYD8 2048 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 KALRNO60229 2985 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
HDAC3-206ENST00000471968 MYO10Q9HD67 2058 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MYO9AB2RTY4 2548 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MYL3P08590 195 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 BMPR1AP36894 532 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 STAT3P40763 770 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MECOMQ03112 1051 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 TBC1D8BQ0IIM8 1120 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 TMEM63BQ5T3F8 832 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 IL31Q6EBC2 164 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 C19orf48Q6RUI8 117 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MAPKAPK5Q8IW41 473 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 CCDC144CPQ8IYA2 1237 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 MAGEB6Q8N7X4 407 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 C8orf58Q8NAV2 365 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 CAGE1Q8TC20 777 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 DNAAF4Q8WXU2 420 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 CACNA2D2Q9NY47 1150 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 GMEB2Q9UKD1 530 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 NLRC5Q86WI3 1866 aa8.17□□□□□ -1.1
HDAC3-206ENST00000471968 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
HDAC3-206ENST00000471968 SEMA3EO15041 775 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms