RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 F13BP05160 661 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 PSMC4P43686 418 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 GTF2A2P52657 109 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 MTMR3Q13615 1198 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 ACAP1Q15027 740 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 TMC4Q7Z404 712 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 USP38Q8NB14 1042 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 AGBL3Q8NEM8 1001 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 ASAP3Q8TDY4 903 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 SNX29Q8TEQ0 813 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 FBXL18Q96ME1 805 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 BHLHE41Q9C0J9 482 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-213ENST00000471667 SOX17Q9H6I2 414 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-213ENST00000471667 SLC52A2Q9HAB3 445 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 MYOZ2Q9NPC6 264 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 SERPINA10Q9UK55 444 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 LEMD3Q9Y2U8 911 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 HTTP42858 3142 aa4.91□□□□□ -1.62
LRCH3-213ENST00000471667 ZNF646O15015 1829 aaPredicted RBP4.9□□□□□ -1.62
LRCH3-213ENST00000471667 COL2A1P02458 1487 aaPredicted RBP4.9□□□□□ -1.62
LRCH3-213ENST00000471667 FAM95CA0A1B0GW59 222 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 YDJCA8MPS7 323 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ECE2O60344 883 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 TLR2O60603 784 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ESRRAP11474 423 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ALADP13716 330 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 DRD2P14416 443 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 FOSL1P15407 271 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 FCGRTP55899 365 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 PDE3AQ14432 1141 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 MSMPQ1L6U9 139 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 LDLRAD1Q5T700 205 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 PRAMEF18Q5VWM3 479 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 SP8Q8IXZ3 490 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ABI1Q8IZP0 508 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 NECAB3Q96P71 396 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-213ENST00000471667 PRRX2Q99811 253 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 OSBPL1AQ9BXW6 950 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 TTYH1Q9H313 450 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-213ENST00000471667 DBNDD1Q9H9R9 158 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.63
LRCH3-213ENST00000471667 LATS2Q9NRM7 1088 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 FOXD3Q9UJU5 478 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-213ENST00000471667 CENPFP49454 3210 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 ADGRA2Q96PE1 1338 aa4.9□□□□□ -1.63
LRCH3-213ENST00000471667 CCL15-CCL14A0A0B4J2E2 113 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 USP11P51784 963 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 ZNF280AP59817 542 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 GSTM4Q03013 218 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 EHHADHQ08426 723 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 SLC39A6Q13433 755 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 AAMPQ13685 434 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 COL9A2Q14055 689 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 NFKBIBQ15653 356 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 CPSF6Q16630 551 aaKnown RBP eCLIP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 CCL15Q16663 113 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 SUPT20HL1Q3ZLR7 823 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 EXOSC6Q5RKV6 272 aaKnown RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 PEAR1Q5VY43 1037 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 PAOXQ6QHF9 649 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 ANKRD13AQ8IZ07 590 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 SHISA5Q8N114 240 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 FBLIM1Q8WUP2 373 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 ZKSCAN4Q969J2 545 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 PUS7Q96PZ0 661 aaKnown RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 ARHGAP39Q9C0H5 1083 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 IRF2BPLQ9H1B7 796 aa4.89□□□□□ -1.63
LRCH3-213ENST00000471667 ASTN2O75129 1339 aaPredicted RBP4.89□□□□□ -1.63
LRCH3-213ENST00000471667 METTL12A8MUP2 240 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 PI4K2BG5E9Z4 385 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ADCY3O60266 1144 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 NPR3P17342 541 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 USP5P45974 858 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ID4P47928 161 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 MMP14P50281 582 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 SOX4Q06945 474 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 CCDC85BQ15834 202 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 CDPF1Q6NVV7 123 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 DDX46Q7L014 1031 aaKnown RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ZBTB38Q8NAP3 1195 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 C2CD4AQ8NCU7 369 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 DIS3LQ8TF46 1054 aaKnown RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 METTL22Q9BUU2 404 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ZC3H12CQ9C0D7 883 aaKnown RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ROCK2O75116 1388 aaKnown RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 COL1A1P02452 1464 aaPredicted RBP4.88□□□□□ -1.63
LRCH3-213ENST00000471667 CACNA1BQ00975 2339 aa4.88□□□□□ -1.63
LRCH3-213ENST00000471667 ARID1BQ8NFD5 2236 aaPredicted RBP4.87□□□□□ -1.63
LRCH3-213ENST00000471667 FZD6O60353 706 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 EIF4EBP3O60516 100 aaPredicted RBP4.87□□□□□ -1.63
LRCH3-213ENST00000471667 FAM13AO94988 1023 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 PRNPP04156 253 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 VIL1P09327 827 aaKnown RBP4.87□□□□□ -1.63
LRCH3-213ENST00000471667 CETPP11597 493 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 ADMP35318 185 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 CAP1Q01518 475 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 PRKCZQ05513 592 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 PPP1R42Q7Z4L9 355 aa4.87□□□□□ -1.63
LRCH3-213ENST00000471667 OPTNQ96CV9 577 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms