RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MCCP23508 829 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 CPT1AP50416 773 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 GRB10Q13322 594 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 MUM1L1Q5H9M0 696 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 WDR11Q9BZH6 1224 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 CYP39A1Q9NYL5 469 aa22.54■■□□□ 1.2
NCKIPSD-209ENST00000470006 KCNJ6P48051 423 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 CHMP4BP1P59074 171 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 DUSP28Q4G0W2 176 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 BRDTQ58F21 947 aaPredicted RBP22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 KCTD1Q719H9 257 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 PPP1R13LQ8WUF5 828 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 KHSRPQ92945 711 aaKnown RBP eCLIP22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 PURBQ96QR8 312 aaKnown RBP22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 MTG1Q9BT17 334 aaPredicted RBP22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 CCPG1Q9ULG6 757 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 NOD1Q9Y239 953 aa22.53■■□□□ 1.2
NCKIPSD-209ENST00000470006 ARHGEF15O94989 841 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 PURAQ00577 322 aaKnown RBP22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 TFAP4Q01664 338 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 PDE4BQ07343 736 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 NBPF20Q3BBV1 942 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 OR6J1Q8NGC5 347 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 ZBED2Q9BTP6 218 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 MTMR7Q9Y216 660 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 MUC6Q6W4X9 2439 aa22.52■■□□□ 1.2
NCKIPSD-209ENST00000470006 IQCF3P0C7M6 154 aa22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 ALYREFQ86V81 257 aaKnown RBP22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 NEDD1Q8NHV4 660 aa22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 APPBP2Q92624 585 aa22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 OSBP2Q969R2 916 aa22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 GMCL1Q96IK5 515 aa22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 ADD3Q9UEY8 706 aaKnown RBP22.51■■□□□ 1.19
NCKIPSD-209ENST00000470006 GPAA1O43292 621 aa22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 SLC3A2P08195 630 aaKnown RBP22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 GNAT2P19087 354 aa22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 BFSP2Q13515 415 aa22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 EPB41L4AQ9HCS5 686 aaPredicted RBP22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 C11orf16Q9NQ32 467 aa22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 STX8Q9UNK0 236 aa22.5■■□□□ 1.19
NCKIPSD-209ENST00000470006 PIEZO1Q92508 2521 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 MS4A1P11836 297 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 UIMC1Q96RL1 719 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 LRRCC1Q9C099 1032 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 PRR12Q9ULL5 1215 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 RAD50Q92878 1312 aa22.49■■□□□ 1.19
NCKIPSD-209ENST00000470006 PTPDC1A2A3K4 754 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 PI4K2BG5E9Z4 385 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 PITPNM1O00562 1244 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 BAATQ14032 418 aaPredicted RBP22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 RCSD1Q6JBY9 416 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 SPRED2Q7Z698 418 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 KBTBD3Q8NAB2 608 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 GDPD5Q8WTR4 605 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 NACAP1Q9BZK3 213 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 MTUS1Q9ULD2 1270 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 BRWD1Q9NSI6 2320 aa22.48■■□□□ 1.19
NCKIPSD-209ENST00000470006 TRIP12Q14669 1992 aaPredicted RBP22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 PATL2C9JE40 543 aaKnown RBP22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 PLA2G6O60733 806 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 BAIAP3O94812 1187 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 ALDH5A1P51649 535 aaPredicted RBP22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 CCDC96Q2M329 555 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 PPP4R3BQ5MIZ7 849 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 NFRKBQ6P4R8 1299 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 IFNL3Q8IZI9 196 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 TET1Q8NFU7 2136 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 MORC4Q8TE76 937 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 ECHDC1Q9NTX5 307 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 DDX19BQ9UMR2 479 aa22.47■■□□□ 1.19
NCKIPSD-209ENST00000470006 COL4A4P53420 1690 aaPredicted RBP22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 M0R2C6 588 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 LPXNO60711 386 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 SSTR3P32745 418 aaPredicted RBP22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 PPP2R5BQ15173 497 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 CD320Q9NPF0 282 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 PLIN4Q96Q06 1357 aa22.46■■□□□ 1.19
NCKIPSD-209ENST00000470006 TANC1Q9C0D5 1861 aa22.45■■□□□ 1.19
NCKIPSD-209ENST00000470006 LCTP09848 1927 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 LCHNA4D1U4 455 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 KPNA6O60684 536 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 ICAM1P05362 532 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 CALML3P27482 149 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 HNRNPUQ00839 825 aaKnown RBP eCLIP22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 PDE4DQ08499 809 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 TMCO2Q7Z6W1 182 aaPredicted RBP22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 CCDC155Q8N6L0 562 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 MPHOSPH6Q99547 160 aaKnown RBP22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 NAPBQ9H115 298 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 ZBTB40Q9NUA8 1239 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 LMCD1Q9NZU5 365 aa22.45■■□□□ 1.18
NCKIPSD-209ENST00000470006 TSPY2A6NKD2 308 aa22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 ZFYP08048 801 aaPredicted RBP22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 PTGISQ16647 500 aa22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 CSPP1Q1MSJ5 1256 aa22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 GJD3Q8N144 294 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms