RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 SRBD1Q8N5C6 995 aaKnown RBP20.56■□□□□ 0.88
SF1-212ENST00000463343 ARRDC4Q8NCT1 418 aa20.56■□□□□ 0.88
SF1-212ENST00000463343 CLEC4DQ8WXI8 215 aa20.56■□□□□ 0.88
SF1-212ENST00000463343 LZTS2Q9BRK4 669 aa20.56■□□□□ 0.88
SF1-212ENST00000463343 A1CFQ9NQ94 594 aaKnown RBP20.56■□□□□ 0.88
SF1-212ENST00000463343 DIS3Q9Y2L1 958 aaKnown RBP20.56■□□□□ 0.88
SF1-212ENST00000463343 ZNF236Q9UL36 1845 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 ZBTB5O15062 677 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 ZBTB43O43298 467 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 PPP1R11O60927 126 aaPredicted RBP20.55■□□□□ 0.88
SF1-212ENST00000463343 CYBAP13498 195 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 USH1GQ495M9 461 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 MAML3Q96JK9 1138 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 SPZ1Q9BXG8 430 aa20.55■□□□□ 0.88
SF1-212ENST00000463343 POTEB2H3BUK9 544 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 NFIBO00712 420 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 CNGA1P29973 690 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 CYP2C19P33261 490 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
SF1-212ENST00000463343 HOMER1Q86YM7 354 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 TRPV1Q8NER1 839 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 LBHD1Q9BQE6 289 aaPredicted RBP20.54■□□□□ 0.88
SF1-212ENST00000463343 FAM217BQ9NTX9 383 aaPredicted RBP20.54■□□□□ 0.88
SF1-212ENST00000463343 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
SF1-212ENST00000463343 NAP1L2Q9ULW6 460 aaPredicted RBP20.54■□□□□ 0.88
SF1-212ENST00000463343 PNMA6FA0A0J9YX94 578 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 RCAN1P53805 252 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 EVCP57679 992 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 MDM2Q00987 491 aaPredicted RBP20.53■□□□□ 0.88
SF1-212ENST00000463343 CNTN2Q02246 1040 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 BAATQ14032 418 aaPredicted RBP20.53■□□□□ 0.88
SF1-212ENST00000463343 NSMFQ6X4W1 530 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 TMTC3Q6ZXV5 915 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 Q7L0L9 218 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 FAM133AQ8N9E0 248 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 TBC1D5Q92609 795 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 FGD4Q96M96 766 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 AMNQ9BXJ7 453 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 CYP39A1Q9NYL5 469 aa20.53■□□□□ 0.88
SF1-212ENST00000463343 GOLGA8AA7E2F4 631 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 GOLGA8BA8MQT2 603 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 SEPT4O43236 478 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 CDC27P30260 824 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 RTN1Q16799 776 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 CCDC82Q8N4S0 544 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 LARP6Q9BRS8 491 aaKnown RBP20.52■□□□□ 0.88
SF1-212ENST00000463343 TINF2Q9BSI4 451 aa20.52■□□□□ 0.88
SF1-212ENST00000463343 ALDH8A1Q9H2A2 487 aaPredicted RBP20.52■□□□□ 0.88
SF1-212ENST00000463343 RBM28Q9NW13 759 aaKnown RBP20.52■□□□□ 0.88
SF1-212ENST00000463343 LAMA2P24043 3122 aaKnown RBP20.52■□□□□ 0.88
SF1-212ENST00000463343 ABCB11O95342 1321 aa20.52■□□□□ 0.87
SF1-212ENST00000463343 SOWAHBA6NEL2 793 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 PDIA3P30101 505 aaKnown RBP20.51■□□□□ 0.87
SF1-212ENST00000463343 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
SF1-212ENST00000463343 FUT2Q10981 343 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 C1orf53Q5VUE5 145 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 RRP36Q96EU6 259 aaKnown RBP20.51■□□□□ 0.87
SF1-212ENST00000463343 PURBQ96QR8 312 aaKnown RBP20.51■□□□□ 0.87
SF1-212ENST00000463343 PRKAG2Q9UGJ0 569 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 MRPL11Q9Y3B7 192 aaKnown RBP20.51■□□□□ 0.87
SF1-212ENST00000463343 PCDHA1Q9Y5I3 950 aa20.51■□□□□ 0.87
SF1-212ENST00000463343 SNX17Q15036 470 aa20.5■□□□□ 0.87
SF1-212ENST00000463343 PRAMEF19Q5SWL8 479 aa20.5■□□□□ 0.87
SF1-212ENST00000463343 MAMDC4Q6UXC1 1216 aa20.5■□□□□ 0.87
SF1-212ENST00000463343 SLC39A5Q6ZMH5 540 aa20.5■□□□□ 0.87
SF1-212ENST00000463343 RNF207Q6ZRF8 634 aa20.5■□□□□ 0.87
SF1-212ENST00000463343 ZNF467Q7Z7K2 595 aaPredicted RBP20.5■□□□□ 0.87
SF1-212ENST00000463343 hCG_1642624A0A1W2PR95 340 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 PTPDC1A2A3K4 754 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 OPLAHO14841 1288 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
SF1-212ENST00000463343 RTP1P59025 263 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 RPS6P62753 249 aaKnown RBP20.49■□□□□ 0.87
SF1-212ENST00000463343 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
SF1-212ENST00000463343 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
SF1-212ENST00000463343 CALML3P27482 149 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 ATN1P54259 1190 aaPredicted RBP20.48■□□□□ 0.87
SF1-212ENST00000463343 TRAF1Q13077 416 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 GJC2Q5T442 439 aaPredicted RBP20.48■□□□□ 0.87
SF1-212ENST00000463343 SLC30A10Q6XR72 485 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
SF1-212ENST00000463343 ZNF274Q96GC6 653 aaPredicted RBP20.48■□□□□ 0.87
SF1-212ENST00000463343 KIF2CQ99661 725 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 C22orf23Q9BZE7 217 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 MAF1Q9H063 256 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 ASTN1O14525 1302 aa20.48■□□□□ 0.87
SF1-212ENST00000463343 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
SF1-212ENST00000463343 V9GY48 417 aaPredicted RBP20.47■□□□□ 0.87
SF1-212ENST00000463343 NID2Q14112 1375 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
SF1-212ENST00000463343 NEK4P51957 841 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 AK2P54819 239 aa20.46■□□□□ 0.87
SF1-212ENST00000463343 CCT2P78371 535 aaKnown RBP20.46■□□□□ 0.87
SF1-212ENST00000463343 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
SF1-212ENST00000463343 NCOA5Q9HCD5 579 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms