RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SLC9A7Q96T83 725 aa20.49■□□□□ 0.87
UBE2D4-209ENST00000454428 SUPT20HL2P0C7V6 817 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 KIAA1211Q6ZU35 1233 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 RASGRP2Q7LDG7 609 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 NEDD1Q8NHV4 660 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 PHOSPHO2Q8TCD6 241 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 STAG1Q8WVM7 1258 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 GMCL1Q96IK5 515 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 VTA1Q9NP79 307 aa20.48■□□□□ 0.87
UBE2D4-209ENST00000454428 IQCF3P0C7M6 154 aa20.47■□□□□ 0.87
UBE2D4-209ENST00000454428 FAM160B2Q86V87 743 aa20.47■□□□□ 0.87
UBE2D4-209ENST00000454428 ZBTB40Q9NUA8 1239 aa20.47■□□□□ 0.87
UBE2D4-209ENST00000454428 PI4K2BG5E9Z4 385 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 GPAA1O43292 621 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 PLA2G6O60733 806 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 HMMRO75330 724 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 MCCP23508 829 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 RFC2P35250 354 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 NBPF20Q3BBV1 942 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 CHURC1Q8WUH1 139 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 POLR3EQ9NVU0 708 aa20.46■□□□□ 0.87
UBE2D4-209ENST00000454428 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 LCHNA4D1U4 455 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 M0R2C6 588 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 ACTN1P12814 892 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 KCTD1Q719H9 257 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 APPBP2Q92624 585 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 PRR12Q9ULL5 1215 aa20.45■□□□□ 0.86
UBE2D4-209ENST00000454428 RBAK-RBAKDNI3L0D1 243 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 SMARCA5O60264 1052 aaPredicted RBP20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 MYL3P08590 195 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 SLC1A4P43007 532 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 TDO2P48775 406 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 GPNMBQ14956 572 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 KBTBD3Q8NAB2 608 aa20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 MTG1Q9BT17 334 aaPredicted RBP20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 ISY1Q9ULR0 285 aaKnown RBP20.44■□□□□ 0.86
UBE2D4-209ENST00000454428 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 ALDH5A1P51649 535 aaPredicted RBP20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 TFAP4Q01664 338 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 IKQ13123 557 aaPredicted RBP20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 NSMFQ6X4W1 530 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 TMCO2Q7Z6W1 182 aaPredicted RBP20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 IFNL3Q8IZI9 196 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 ZNF287Q9HBT7 754 aa20.43■□□□□ 0.86
UBE2D4-209ENST00000454428 RNF113AO15541 343 aaKnown RBP20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 CPT1AP50416 773 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 BAATQ14032 418 aaPredicted RBP20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 FAM47CQ5HY64 1035 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 RCSD1Q6JBY9 416 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 NFRKBQ6P4R8 1299 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 FTOQ9C0B1 505 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 CCPG1Q9ULG6 757 aa20.42■□□□□ 0.86
UBE2D4-209ENST00000454428 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 NFIBO00712 420 aa20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 ICAM1P05362 532 aa20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 ALYREFQ86V81 257 aaKnown RBP20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 OR6J1Q8NGC5 347 aa20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 IL17RBQ9NRM6 502 aa20.41■□□□□ 0.86
UBE2D4-209ENST00000454428 KIF28PB7ZC32 967 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 NMT2O60551 498 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 TRIOO75962 3097 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 GNAT2P19087 354 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 WDR5P61964 334 aaKnown RBP20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 TCTN1Q2MV58 587 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 TSHZ3Q63HK5 1081 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 COPS5Q92905 334 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 LRRCC1Q9C099 1032 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 RANBP17Q9H2T7 1088 aaKnown RBP20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 ECHDC1Q9NTX5 307 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 LMCD1Q9NZU5 365 aa20.4■□□□□ 0.86
UBE2D4-209ENST00000454428 SIP14410 1827 aa20.39■□□□□ 0.86
UBE2D4-209ENST00000454428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 A6NJR5 290 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 APPP05067 770 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 DEFB103AP81534 67 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 SUGCTQ9HAC7 445 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 INCENPQ9NQS7 918 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 C5orf42Q9H799 3197 aa20.39■□□□□ 0.85
UBE2D4-209ENST00000454428 LOC102724159A0A0B4J2E5 919 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 PTPN11Q06124 597 aaPredicted RBP20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 PDE4BQ07343 736 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 PPARAQ07869 468 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 PWP2Q15269 919 aaKnown RBP20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 TTBK2Q6IQ55 1244 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 SLC30A10Q6XR72 485 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 FAM178BQ8IXR5 827 aa20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 UBE2ZQ9H832 354 aaPredicted RBP20.38■□□□□ 0.85
UBE2D4-209ENST00000454428 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms