RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 MROH7Q68CQ1 1323 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 EYSQ5T1H1 3165 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 RBM47A0AV96 593 aaKnown RBP21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 DYNC1LI2O43237 492 aaPredicted RBP21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 EDNRBP24530 442 aa21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 IQCA1Q86XH1 822 aa21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 ZSCAN10Q96SZ4 725 aaPredicted RBP21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 ADD3Q9UEY8 706 aaKnown RBP21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 UNC80Q8N2C7 3258 aa21.71■■□□□ 1.07
UBE2D4-208ENST00000454350 PTPDC1A2A3K4 754 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 SMAD3P84022 425 aaKnown RBP21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 FPGSQ05932 587 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 IMMTQ16891 758 aaKnown RBP21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 DUSP28Q4G0W2 176 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 CCDC178Q5BJE1 867 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 RNF207Q6ZRF8 634 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 NOL8Q76FK4 1167 aaKnown RBP21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 C16orf59Q7L2K0 433 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 PNMA2Q9UL42 364 aa21.7■■□□□ 1.06
UBE2D4-208ENST00000454350 CALML3P27482 149 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 MFSD5Q6N075 450 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 KIAA1211Q6ZU35 1233 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 VTI1AQ96AJ9 217 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 AP5M1Q9H0R1 490 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 CTNNA3Q9UI47 895 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 MYO9BQ13459 2157 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 TNKSO95271 1327 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 GBF1Q92538 1859 aa21.69■■□□□ 1.06
UBE2D4-208ENST00000454350 CABYRO75952 493 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 SEC23AQ15436 765 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 ADGRF4Q8IZF3 695 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 RGS22Q8NE09 1264 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 TBC1D5Q92609 795 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 FAM161BQ96MY7 647 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 TTYH1Q9H313 450 aaPredicted RBP21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 KAT14Q9H8E8 782 aa21.68■■□□□ 1.06
UBE2D4-208ENST00000454350 CUL9Q8IWT3 2517 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 MYH7BA7E2Y1 1941 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 ITGA7Q13683 1181 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 CDC37Q16543 378 aaPredicted RBP21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 USH1GQ495M9 461 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 CYB5R4Q7L1T6 521 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 SLC17A8Q8NDX2 589 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 DNERQ8NFT8 737 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 RNPC3Q96LT9 517 aaKnown RBP21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 WDR11Q9BZH6 1224 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 KRT23Q9C075 422 aa21.67■■□□□ 1.06
UBE2D4-208ENST00000454350 RAD50Q92878 1312 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 CHMLP26374 656 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 PSMC6P62333 389 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 PTH1RQ03431 593 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 ASPRV1Q53RT3 343 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 SEMA6BQ9H3T3 888 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 CNNM2Q9H8M5 875 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 JMJD4Q9H9V9 463 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 COL20A1Q9P218 1284 aa21.66■■□□□ 1.06
UBE2D4-208ENST00000454350 SCN5AQ14524 2016 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 CSF2RAP15509 400 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 QRICH1Q2TAL8 776 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 TMEM240Q5SV17 173 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 ZNF697Q5TEC3 545 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 RASIP1Q5U651 963 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 STAG2Q8N3U4 1231 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 TAF6LQ9Y6J9 622 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 PRUNE2Q8WUY3 3088 aa21.65■■□□□ 1.06
UBE2D4-208ENST00000454350 UMODL1Q5DID0 1318 aa21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 ZEB2O60315 1214 aa21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 CYP21A2P08686 494 aa21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 PPP1R12CQ9BZL4 782 aa21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 MAF1Q9H063 256 aa21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 TRIP12Q14669 1992 aaPredicted RBP21.64■■□□□ 1.05
UBE2D4-208ENST00000454350 ABCB11O95342 1321 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 OPLAHO14841 1288 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 TLR3O15455 904 aaKnown RBP21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 B4GALT4O60513 344 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 PARP1P09874 1014 aaKnown RBP21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 CYP2C18P33260 490 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 PURAQ00577 322 aaKnown RBP21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 PDE4DQ08499 809 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 SLC35G1Q2M3R5 365 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 SYTL5Q8TDW5 730 aaPredicted RBP21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 VWCEQ96DN2 955 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 MTMR8Q96EF0 704 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 CDX2Q99626 313 aaPredicted RBP21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 UBAC1Q9BSL1 405 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 SEZ6LQ9BYH1 1024 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 TRPV6Q9H1D0 765 aa21.63■■□□□ 1.05
UBE2D4-208ENST00000454350 ARIH2O95376 493 aa21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 PPIGQ13427 754 aaKnown RBP eCLIP21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 CCDC62Q6P9F0 684 aa21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 COPS5Q92905 334 aa21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 TAAR1Q96RJ0 339 aa21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 NOC4LQ9BVI4 516 aaKnown RBP21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 MAD2L2Q9UI95 211 aa21.62■■□□□ 1.05
UBE2D4-208ENST00000454350 PPP1R11O60927 126 aaPredicted RBP21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 ACRP10323 421 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms