RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	MAGEA10	P43363	369 aa	Predicted RBP	18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	GJA9	P57773	515 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	SNX17	Q15036	470 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	NECTIN1	Q15223	517 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	KCNA10	Q16322	511 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	TLK2	Q86UE8	772 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	MCF2L2	Q86YR7	1114 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	ZNF654	Q8IZM8	581 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	PCSK9	Q8NBP7	692 aa	Known RBP	18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	RGS22	Q8NE09	1264 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	DNER	Q8NFT8	737 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	CTCFL	Q8NI51	663 aa	Predicted RBP	18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	IGDCC4	Q8TDY8	1250 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	MORC4	Q8TE76	937 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	TMEM87B	Q96K49	555 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	MTA3	Q9BTC8	594 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	AP5M1	Q9H0R1	490 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	LY9	Q9HBG7	655 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	STARD7	Q9NQZ5	370 aa		18.37	■□□□□ 0.53
HDLBP-223	ENST00000449864	CCDC69	A6NI79	296 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	ZBTB5	O15062	677 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	DDAH1	O94760	285 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	TROAP	Q12815	778 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	GNAS	Q5JWF2	1037 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	IQSEC1	Q6DN90	963 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	KLHDC9	Q8NEP7	349 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	GLT1D1	Q96MS3	346 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	MAF1	Q9H063	256 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	PRO3102	Q9H379	93 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864	PDGFC	Q9NRA1	345 aa		18.36	■□□□□ 0.53
HDLBP-223	ENST00000449864		A0A1W2PPC1	479 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	SH2B2	O14492	632 aa	Predicted RBP	18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	SLC34A2	O95436	690 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	KIF5B	P33176	963 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	IRX5	P78411	483 aa	Predicted RBP	18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	TRAF1	Q13077	416 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	C1orf53	Q5VUE5	145 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	TAPT1	Q6NXT6	567 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	GDF15	Q99988	308 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	MYL10	Q9BUA6	226 aa		18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	GPHN	Q9NQX3	736 aa	Predicted RBP	18.35	■□□□□ 0.53
HDLBP-223	ENST00000449864	CFB	P00751	764 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	CENPB	P07199	599 aa	Predicted RBP	18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	ASGR1	P07306	291 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	SMPD1	P17405	629 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	MDM2	Q00987	491 aa	Predicted RBP	18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	BEX3	Q00994	111 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	TMTC2	Q8N394	836 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	VTI1A	Q96AJ9	217 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	MTMR8	Q96EF0	704 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	PIGS	Q96S52	555 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	UBE2O	Q9C0C9	1292 aa	Known RBP	18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	PCDH10	Q9P2E7	1040 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	GNE	Q9Y223	722 aa	Known RBP	18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	PCDHA1	Q9Y5I3	950 aa		18.34	■□□□□ 0.53
HDLBP-223	ENST00000449864	PQBP1	O60828	265 aa	Known RBP	18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	PPP1R11	O60927	126 aa	Predicted RBP	18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	CALM1	P0DP23	149 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	CALM2	P0DP24	149 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	CALM3	P0DP25	149 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	FXR1	P51114	621 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	TLE2	Q04725	743 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	FSCN1	Q16658	493 aa	Known RBP	18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	PIBF1	Q8WXW3	757 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	TBC1D5	Q92609	795 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	MAP3K14	Q99558	947 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	LRRC2	Q9BYS8	371 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	WDR11	Q9BZH6	1224 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	RIOX1	Q9H6W3	641 aa		18.33	■□□□□ 0.52
HDLBP-223	ENST00000449864	DYNC1LI2	O43237	492 aa	Predicted RBP	18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	ZEB2	O60315	1214 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	EDNRB	P24530	442 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	BMP8B	P34820	402 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	LIFR	P42702	1097 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	PPP2R5B	Q15173	497 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	DUSP28	Q4G0W2	176 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	NSUN6	Q8TEA1	469 aa	Known RBP	18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	RMDN3	Q96TC7	470 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	PDLIM7	Q9NR12	457 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864		Q9Y3F1	56 aa		18.32	■□□□□ 0.52
HDLBP-223	ENST00000449864	ELP1	O95163	1332 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	MROH7	Q68CQ1	1323 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	PNMA6F	A0A0J9YX94	578 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	CTAGE5	O15320	804 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	CYTH3	O43739	400 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	CLTB	P09497	229 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	EIF2AK2	P19525	551 aa	Known RBP	18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	PTGS1	P23219	599 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	NKX3-2	P78367	333 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	COL9A3	Q14050	684 aa	Predicted RBP	18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	KRT32	Q14532	448 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	SLC35G1	Q2M3R5	365 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	ARHGEF16	Q5VV41	709 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	OR6J1	Q8NGC5	347 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	SCFD2	Q8WU76	684 aa		18.31	■□□□□ 0.52
HDLBP-223	ENST00000449864	NEK1	Q96PY6	1258 aa		18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 816.4 ms