RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FOXP1Q9H334 677 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-210ENST00000449116 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
SHANK2-210ENST00000449116 M0R2N6 131 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 ADAMTS3O15072 1205 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 BRD1O95696 1058 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 CLK2P49760 499 aaKnown RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 HSD17B4P51659 736 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 RPS6P62753 249 aaKnown RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 UBE2SQ16763 222 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 WDR78Q5VTH9 848 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 OXER1Q8TDS5 423 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 TBC1D5Q92609 795 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 A1CFQ9NQ94 594 aaKnown RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-210ENST00000449116 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.28
SHANK2-210ENST00000449116 PFASO15067 1338 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 KIF28PB7ZC32 967 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
SHANK2-210ENST00000449116 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-210ENST00000449116 NR5A1Q13285 461 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 AP3B2Q13367 1082 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 BAATQ14032 418 aaPredicted RBP16.76■□□□□ 0.27
SHANK2-210ENST00000449116 KCTD2Q14681 263 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 JAKMIP3Q5VZ66 844 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 SLC30A10Q6XR72 485 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 RASGRP4Q8TDF6 673 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 MMP19Q99542 508 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 CYP39A1Q9NYL5 469 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
SHANK2-210ENST00000449116 RBBP6Q7Z6E9 1792 aaKnown RBP16.75■□□□□ 0.27
SHANK2-210ENST00000449116 SPDYE3A6NKU9 549 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 FOSP01100 380 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-210ENST00000449116 FCER1AP12319 257 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 SYTL5Q8TDW5 730 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-210ENST00000449116 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
SHANK2-210ENST00000449116 TMEM260Q9NX78 707 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 ZDHHC9Q9Y397 364 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
SHANK2-210ENST00000449116 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 STRNO43815 780 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 F13A1P00488 732 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 SP3Q02447 781 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 RESTQ13127 1097 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
SHANK2-210ENST00000449116 KRT25Q7Z3Z0 450 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 NOSTRINQ8IVI9 506 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 ABRAQ8N0Z2 381 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
SHANK2-210ENST00000449116 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
SHANK2-210ENST00000449116 PTPREP23469 700 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
SHANK2-210ENST00000449116 GRB14Q14449 540 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
SHANK2-210ENST00000449116 PIK3AP1Q6ZUJ8 805 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 BRAPQ7Z569 592 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 WBP1LQ9NX94 342 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 COL20A1Q9P218 1284 aa16.73■□□□□ 0.27
SHANK2-210ENST00000449116 SLC15A5A6NIM6 579 aa16.72■□□□□ 0.27
SHANK2-210ENST00000449116 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
SHANK2-210ENST00000449116 GPR25O00155 361 aa16.72■□□□□ 0.27
SHANK2-210ENST00000449116 FCGRTP55899 365 aa16.72■□□□□ 0.27
SHANK2-210ENST00000449116 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHANK2-210ENST00000449116 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
SHANK2-210ENST00000449116 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
SHANK2-210ENST00000449116 DNAJC25-GNG10A0A024R161 153 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
SHANK2-210ENST00000449116 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
SHANK2-210ENST00000449116 ADORA2AP29274 412 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 KIF22Q14807 665 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 FAM133AQ8N9E0 248 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 TAAR1Q96RJ0 339 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
SHANK2-210ENST00000449116 ADD3Q9UEY8 706 aaKnown RBP16.71■□□□□ 0.27
SHANK2-210ENST00000449116 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 RPTORQ8N122 1335 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 FAM205CA6NFA0 338 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 PGK2P07205 417 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 CTGFP29279 349 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 SREBF1P36956 1147 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 PSMC4P43686 418 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 CNTN2Q02246 1040 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 INF2Q27J81 1249 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 MORN1Q5T089 497 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
SHANK2-210ENST00000449116 NSUN6Q8TEA1 469 aaKnown RBP16.7■□□□□ 0.26
SHANK2-210ENST00000449116 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms