RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
SDCCAG3-206ENST00000446833 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 NFIBO00712 420 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 ACRP10323 421 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 NMIQ13287 307 aaPredicted RBP20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 ZNF589Q86UQ0 364 aaPredicted RBP20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 MPHOSPH6Q99547 160 aaKnown RBP20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 PBX4Q9BYU1 374 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 WDR11Q9BZH6 1224 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 GPCPD1Q9NPB8 672 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 CHD7Q9P2D1 2997 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 FRMPD2Q68DX3 1309 aaPredicted RBP20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 LRRC37A2A6NM11 1700 aa20.22■□□□□ 0.83
SDCCAG3-206ENST00000446833 RBM47A0AV96 593 aaKnown RBP20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 FGBP02675 491 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 SNHG28P0DPA3 235 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 ZNF543Q08ER8 600 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 RNF207Q6ZRF8 634 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 CLEC4DQ8WXI8 215 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 NOC4LQ9BVI4 516 aaKnown RBP20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 POLR3EQ9NVU0 708 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 WDR19Q8NEZ3 1342 aa20.21■□□□□ 0.83
SDCCAG3-206ENST00000446833 B4GALT4O60513 344 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 PTGS1P23219 599 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 CPT1AP50416 773 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 HAND2P61296 217 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 RAB30Q15771 203 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 TMEM63BQ5T3F8 832 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 GPATCH4Q5T3I0 446 aaKnown RBP20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 RPUSD2Q8IZ73 545 aaKnown RBP20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 DNERQ8NFT8 737 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 ESR2Q92731 530 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 TRPV6Q9H1D0 765 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 MSRAQ9UJ68 235 aa20.2■□□□□ 0.82
SDCCAG3-206ENST00000446833 LCTP09848 1927 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 GRXCR1A8MXD5 290 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 B4DLN1 442 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 NKRFO15226 690 aaKnown RBP eCLIP20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 SUPT20HL2P0C7V6 817 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 MRPL12P52815 198 aaKnown RBP20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 PSMC6P62333 389 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 BRDTQ58F21 947 aaPredicted RBP20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 DGKHQ86XP1 1220 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 RGS22Q8NE09 1264 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 RILPL2Q969X0 211 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 LNPKQ9C0E8 428 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 MAF1Q9H063 256 aa20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
SDCCAG3-206ENST00000446833 SDSP20132 328 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 EDNRBP24530 442 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 CALML3P27482 149 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 PBX2P40425 430 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 RPS6P62753 249 aaKnown RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 PURAQ00577 322 aaKnown RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 PDE4DQ08499 809 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 GAS2L1Q99501 681 aaPredicted RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 CXXC1Q9P0U4 656 aaPredicted RBP20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 UMODL1Q5DID0 1318 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 RAD50Q92878 1312 aa20.18■□□□□ 0.82
SDCCAG3-206ENST00000446833 ZNF213O14771 459 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 CCL23P55773 120 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 SCFD2Q8WU76 684 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 MTG1Q9BT17 334 aaPredicted RBP20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 OSBPL3Q9H4L5 887 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 MUC3AQ02505 3323 aa20.17■□□□□ 0.82
SDCCAG3-206ENST00000446833 KPNA6O60684 536 aa20.16■□□□□ 0.82
SDCCAG3-206ENST00000446833 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
SDCCAG3-206ENST00000446833 OTOP2Q7RTS6 562 aa20.16■□□□□ 0.82
SDCCAG3-206ENST00000446833 OR6J1Q8NGC5 347 aa20.16■□□□□ 0.82
SDCCAG3-206ENST00000446833 TRANK1O15050 2925 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 PFKMP08237 780 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 MYL3P08590 195 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 IQCA1Q86XH1 822 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 SLC28A3Q9HAS3 691 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 TNKSO95271 1327 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 NCOR1O75376 2440 aa20.15■□□□□ 0.82
SDCCAG3-206ENST00000446833 NEDD4P46934 1319 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 A6NJR5 290 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 HIP1O00291 1037 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 CHD1LQ86WJ1 897 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 PLEKHM2Q8IWE5 1019 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 ANKS1AQ92625 1134 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 PRDM12Q9H4Q4 367 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 TRMT13Q9NUP7 481 aaKnown RBP20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 SLC4A7Q9Y6M7 1214 aa20.14■□□□□ 0.81
SDCCAG3-206ENST00000446833 GOLGA8HP0CJ92 632 aa20.13■□□□□ 0.81
SDCCAG3-206ENST00000446833 NUCB1Q02818 461 aa20.13■□□□□ 0.81
SDCCAG3-206ENST00000446833 PTPN11Q06124 597 aaPredicted RBP20.13■□□□□ 0.81
SDCCAG3-206ENST00000446833 TTLL4Q14679 1199 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms