RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 C7orf72A4D263 438 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 MEFVO15553 781 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 NRDCO43847 1150 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 RTP1P59025 263 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 LAPTM5Q13571 262 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 NR0B2Q15466 257 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 HSF5Q4G112 596 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 KCNT2Q6UVM3 1135 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 CEP128Q6ZU80 1094 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 USP53Q70EK8 1073 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 APPBP2Q92624 585 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 C19orf44Q9H6X5 657 aa6.71□□□□□ -1.34
HMGB3P6-201ENST00000444896 TRBV23OR9-2A0A075B6M9 112 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 FITM1A5D6W6 292 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 PSPNO60542 156 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 MSCO60682 206 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 ASMTLO95671 621 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 TAL1P17542 331 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 CHRNEQ04844 493 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 FYB2Q5VWT5 728 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 IQCEQ6IPM2 695 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 OXR1Q8N573 874 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 RCBTB1Q8NDN9 531 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 FLAD1Q8NFF5 587 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 NLGN2Q8NFZ4 835 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 DPF3Q92784 378 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 DIO2Q92813 273 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 SHISA4Q96DD7 197 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 NCOA5Q9HCD5 579 aaKnown RBP6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 TRAF6Q9Y4K3 522 aa6.7□□□□□ -1.34
HMGB3P6-201ENST00000444896 SHROOM4Q9ULL8 1493 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 PAX4O43316 350 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 CDC45O75419 566 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 LTBRP36941 435 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 MVKQ03426 396 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 PLEKHG4Q58EX7 1191 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 TRIM61Q5EBN2 209 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 EGFLAMQ63HQ2 1017 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 MCTP1Q6DN14 999 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 STYK1Q6J9G0 422 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 SLC7A14Q8TBB6 771 aa6.69□□□□□ -1.34
HMGB3P6-201ENST00000444896 WTIPA6NIX2 430 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 PLD2O14939 933 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 MSL3P1P0C860 447 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 RAC2P15153 192 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 HSD3B2P26439 372 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 GALK1P51570 392 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 KCNAB2Q13303 367 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 SLC14A2Q15849 920 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 GALNT18Q6P9A2 607 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 RSPO2Q6UXX9 243 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 KIAA0907Q7Z7F0 614 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 NLRX1Q86UT6 975 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 GSTCDQ8NEC7 633 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 MYLIPQ8WY64 445 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 PTPRN2Q92932 1015 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 SLC52A2Q9HAB3 445 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 GPR27Q9NS67 375 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 IMPACTQ9P2X3 320 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 FBXL7Q9UJT9 491 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
HMGB3P6-201ENST00000444896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 KCNQ2O43526 872 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 RAPGEF3O95398 923 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 GABREP78334 506 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 TCEA2Q15560 299 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 FNDC3BQ53EP0 1204 aaKnown RBP6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 JAMLQ86YT9 394 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 LILRA2Q8N149 483 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 GULP1Q9UBP9 304 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 FBLN5Q9UBX5 448 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 CD2APQ9Y5K6 639 aa6.67□□□□□ -1.34
HMGB3P6-201ENST00000444896 NPHS1O60500 1241 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 PRKCAP17252 672 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 JUNBP17275 347 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 AFMP43652 599 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 MAMDC2Q7Z304 686 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 ATG4DQ86TL0 474 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 SYNPOQ8N3V7 929 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 SCLYQ96I15 445 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 ZFYVE21Q9BQ24 234 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 TRIM39Q9HCM9 518 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 PCDHA2Q9Y5H9 948 aa6.66□□□□□ -1.34
HMGB3P6-201ENST00000444896 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms