RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 DAGLAQ9Y4D2 1042 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 MORC3Q14149 939 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ARHGEF16Q5VV41 709 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 TRIML1Q8N9V2 468 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GLG1Q92896 1179 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 YY1AP1Q9H869 796 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RGPD1P0DJD0 1748 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 HAUS3Q68CZ6 603 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE9A4FU28 777 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 TULP2O00295 520 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NEBLO76041 1014 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CASP14P31944 242 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 NOP2P46087 812 aaKnown RBP11.75□□□□□ -0.53
TOP3B-210ENST00000444502 SPP2Q13103 211 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC42Q96M95 316 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 POLLQ9UGP5 575 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
TOP3B-210ENST00000444502 PP2D1A8MPX8 630 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 KRT13P13646 458 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NTRK3Q16288 839 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NLRX1Q86UT6 975 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC65Q8IXS2 484 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 ENOX1Q8TC92 643 aaKnown RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GSDMAQ96QA5 445 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SLC39A2Q9NP94 309 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 FBXO2Q9UK22 296 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SUFUQ9UMX1 484 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 AKR1B1P15121 316 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
TOP3B-210ENST00000444502 VSTM4Q8IW00 320 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 BICDL2A1A5D9 508 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CUL4BQ13620 913 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
TOP3B-210ENST00000444502 STAT2P52630 851 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 BIRC2Q13490 618 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ASPRV1Q53RT3 343 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 DNM3Q9UQ16 869 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ASNSP08243 561 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ARMCX5Q6P1M9 558 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE15A4D2H0 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE8P0CG41 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EEF2P13639 858 aaKnown RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 ERCC5P28715 1186 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CNGA1P29973 690 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 LIG3P49916 1009 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 RBL2Q08999 1139 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 PTPAQ15257 358 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE6Q86UF2 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 CTAGE4Q8IX94 777 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 FAM217BQ9NTX9 383 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-210ENST00000444502 NOD1Q9Y239 953 aa11.73□□□□□ -0.53
TOP3B-210ENST00000444502 EIF3JO75822 258 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 LONP1P36776 959 aaKnown RBP11.72□□□□□ -0.53
TOP3B-210ENST00000444502 RASA3Q14644 834 aa11.72□□□□□ -0.53
TOP3B-210ENST00000444502 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms