RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GAS7O60861 476 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 CENPBP07199 599 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 THBDP07204 575 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 DHX8Q14562 1220 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 VPS72Q15906 364 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 C10orf62Q5T681 223 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 CXorf57Q6NSI4 855 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 GPAT2Q6NUI2 795 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 DTWD1Q8N5C7 304 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 USP33Q8TEY7 942 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 COPS5Q92905 334 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 THG1LQ9NWX6 298 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 TMEFF2Q9UIK5 374 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 PCOLCE2Q9UKZ9 415 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 STXBP3O00186 592 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 MEIS1O00470 390 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 MSCO60682 206 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 PF4V1P10720 104 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 ITIH2P19823 946 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 PCBP2Q15366 365 aaKnown RBP eCLIP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 TRAPPC3LQ5T215 181 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 HDGFL2Q7Z4V5 671 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 CNPY4Q8N129 248 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 FRS2Q8WU20 508 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 CHTF18Q8WVB6 975 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 ZBTB21Q9ULJ3 1066 aa5.23□□□□□ -1.57
CDC42BPA-207ENST00000441725 RNF225M0QZC1 329 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 IFRD1O00458 451 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 PPFIA4O75335 1185 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CKMP06732 381 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 SRGAP2CP0DJJ0 459 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CCND1P24385 295 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 GRIK1P39086 918 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 DGKGP49619 791 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 FBXO11Q86XK2 927 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CCDC103Q8IW40 242 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 FMR1NBQ8N0W7 255 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CLRN3Q8NCR9 226 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 NPLOC4Q8TAT6 608 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 AHCYL2Q96HN2 611 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 PLCD4Q9BRC7 762 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 SLC13A1Q9BZW2 595 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 TCF7L1Q9HCS4 588 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 PRR13Q9NZ81 148 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 ZKSCAN5Q9Y2L8 839 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 NPFFR2Q9Y5X5 522 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 PRAMEF1O95521 474 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 APPP05067 770 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 ATP2A2P16615 1042 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 ETV3P41162 512 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 LSSP48449 732 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 RBM10P98175 930 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 KCNMA1Q12791 1236 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 FDX2Q6P4F2 183 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 C11orf96Q7Z7L8 435 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 DCAF11Q8TEB1 546 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 PSMG3-AS1Q96PY0 264 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 LGR6Q9HBX8 967 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CABP5Q9NP86 173 aa5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 H2AFY2Q9P0M6 372 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-207ENST00000441725 CNTNAP4Q9C0A0 1308 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 A0A0A0MRY4 1105 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 SIGLEC6O43699 453 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 LCP1P13796 627 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 NAT1P18440 290 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 RAB6AP20340 208 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 AMPD1P23109 780 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CTSKP43235 329 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 MECP2P51608 486 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 GPR85P60893 370 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 PURAQ00577 322 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 KLF1Q13351 362 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ODF1Q14990 250 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 TMEM177Q53S58 311 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 IL31Q6EBC2 164 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 EPM2AIP1Q7L775 607 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 NEDD1Q8NHV4 660 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDH19Q8TAB3 1148 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ZFYVE21Q9BQ24 234 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CELF4Q9BZC1 486 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ACSS3Q9H6R3 686 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 PRDM11Q9NQV5 511 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 ANLNQ9NQW6 1124 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 C14orf119Q9NWQ9 140 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 B4GALT6Q9UBX8 382 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 DAGLAQ9Y4D2 1042 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 SOD2P04179 222 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CD3EP07766 207 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 TRIM27P14373 513 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 IFNGR1P15260 489 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 GSK3AP49840 483 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 NEK3P51956 506 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 MINDY4Q4G0A6 757 aa5.21□□□□□ -1.58
CDC42BPA-207ENST00000441725 CRTC3Q6UUV7 619 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms