RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 GPATCH4Q5T3I0 446 aaKnown RBP24.36■■□□□ 1.49
CPNE1-219ENST00000440240 RNF207Q6ZRF8 634 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 C16orf59Q7L2K0 433 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 TBC1D10CQ8IV04 446 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 CLEC4DQ8WXI8 215 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 PPP1R12CQ9BZL4 782 aa24.36■■□□□ 1.49
CPNE1-219ENST00000440240 WDR19Q8NEZ3 1342 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 HIP1O00291 1037 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 PSRC1Q6PGN9 363 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-219ENST00000440240 IQCA1Q86XH1 822 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 MAFAQ8NHW3 353 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-219ENST00000440240 MYLIPQ8WY64 445 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 WDR11Q9BZH6 1224 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 DIAPH3Q9NSV4 1193 aa24.35■■□□□ 1.49
CPNE1-219ENST00000440240 IGHDP01880 384 aa24.34■■□□□ 1.49
CPNE1-219ENST00000440240 DNAJB2P25686 324 aa24.34■■□□□ 1.49
CPNE1-219ENST00000440240 CALML3P27482 149 aa24.34■■□□□ 1.49
CPNE1-219ENST00000440240 CWC27Q6UX04 472 aaKnown RBP24.34■■□□□ 1.49
CPNE1-219ENST00000440240 CDH23Q9H251 3354 aa24.34■■□□□ 1.49
CPNE1-219ENST00000440240 GRIN2DO15399 1336 aa24.34■■□□□ 1.49
CPNE1-219ENST00000440240 RBM47A0AV96 593 aaKnown RBP24.33■■□□□ 1.49
CPNE1-219ENST00000440240 B4DLN1 442 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 CYP2C18P33260 490 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 MRPL12P52815 198 aaKnown RBP24.33■■□□□ 1.49
CPNE1-219ENST00000440240 TMEM63BQ5T3F8 832 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 ZNF365Q70YC5 407 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 DNERQ8NFT8 737 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 HIPK3Q9H422 1215 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 POLR3EQ9NVU0 708 aa24.33■■□□□ 1.49
CPNE1-219ENST00000440240 FOSL2P15408 326 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 PTGS1P23219 599 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 CPT1AP50416 773 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 RPS6P62753 249 aaKnown RBP24.32■■□□□ 1.48
CPNE1-219ENST00000440240 PDE4DQ08499 809 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 RASIP1Q5U651 963 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 SLC30A10Q6XR72 485 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 RGS22Q8NE09 1264 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 YTHDC1Q96MU7 727 aaKnown RBP24.32■■□□□ 1.48
CPNE1-219ENST00000440240 ZKSCAN3Q9BRR0 538 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 MAF1Q9H063 256 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 IL23AQ9NPF7 189 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 NEDD4P46934 1319 aa24.32■■□□□ 1.48
CPNE1-219ENST00000440240 ACRP10323 421 aa24.31■■□□□ 1.48
CPNE1-219ENST00000440240 BRDTQ58F21 947 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-219ENST00000440240 PNMA1Q8ND90 353 aa24.31■■□□□ 1.48
CPNE1-219ENST00000440240 ANKS1AQ92625 1134 aa24.31■■□□□ 1.48
CPNE1-219ENST00000440240 TIFAQ96CG3 184 aa24.31■■□□□ 1.48
CPNE1-219ENST00000440240 MTIF3Q9H2K0 278 aaKnown RBP24.31■■□□□ 1.48
CPNE1-219ENST00000440240 ZNF576Q9H609 170 aa24.31■■□□□ 1.48
CPNE1-219ENST00000440240 GPHNQ9NQX3 736 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-219ENST00000440240 NKRFO15226 690 aaKnown RBP eCLIP24.3■■□□□ 1.48
CPNE1-219ENST00000440240 KDM4AO75164 1064 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 FGBP02675 491 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 GOLGA8HP0CJ92 632 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 PSMC6P62333 389 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 DSCC1Q9BVC3 393 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 TRPV6Q9H1D0 765 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 KAT14Q9H8E8 782 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 CTNNA3Q9UI47 895 aa24.3■■□□□ 1.48
CPNE1-219ENST00000440240 B4GALT4O60513 344 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 SUPT20HL2P0C7V6 817 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 EDNRBP24530 442 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 GRIN2CQ14957 1233 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
CPNE1-219ENST00000440240 EXOC6Q8TAG9 804 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 SCFD2Q8WU76 684 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 HERVK_113Q902F9 699 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 NOC4LQ9BVI4 516 aaKnown RBP24.29■■□□□ 1.48
CPNE1-219ENST00000440240 UBA5Q9GZZ9 404 aa24.29■■□□□ 1.48
CPNE1-219ENST00000440240 KPNA6O60684 536 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 PURAQ00577 322 aaKnown RBP24.28■■□□□ 1.48
CPNE1-219ENST00000440240 PPP2R5BQ15173 497 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 USH1GQ495M9 461 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 RPUSD2Q8IZ73 545 aaKnown RBP24.28■■□□□ 1.48
CPNE1-219ENST00000440240 OR6J1Q8NGC5 347 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 ZSCAN10Q96SZ4 725 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-219ENST00000440240 ALDH8A1Q9H2A2 487 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-219ENST00000440240 ZSWIM5Q9P217 1185 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 RAD50Q92878 1312 aa24.28■■□□□ 1.48
CPNE1-219ENST00000440240 B4E1Z4 1266 aa24.27■■□□□ 1.48
CPNE1-219ENST00000440240 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-219ENST00000440240 COL25A1Q9BXS0 654 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-219ENST00000440240 PBX4Q9BYU1 374 aa24.27■■□□□ 1.48
CPNE1-219ENST00000440240 KRT23Q9C075 422 aa24.27■■□□□ 1.48
CPNE1-219ENST00000440240 EYSQ5T1H1 3165 aa24.27■■□□□ 1.48
CPNE1-219ENST00000440240 MYL3P08590 195 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 CCL23P55773 120 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 ASPRV1Q53RT3 343 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 MCF2L2Q86YR7 1114 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 ADGRF4Q8IZF3 695 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 CNNM2Q9H8M5 875 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 MSRAQ9UJ68 235 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 UMODL1Q5DID0 1318 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 LRRC37A2A6NM11 1700 aa24.26■■□□□ 1.47
CPNE1-219ENST00000440240 LCTP09848 1927 aa24.25■■□□□ 1.47
CPNE1-219ENST00000440240 A6NJR5 290 aa24.25■■□□□ 1.47
CPNE1-219ENST00000440240 GRXCR1A8MXD5 290 aa24.25■■□□□ 1.47
CPNE1-219ENST00000440240 TXNP10599 105 aaKnown RBP24.25■■□□□ 1.47
CPNE1-219ENST00000440240 RAB30Q15771 203 aa24.25■■□□□ 1.47
CPNE1-219ENST00000440240 CDC37Q16543 378 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 1917.9 ms