RNA–Protein interactions for RNA: ENST00000439830.5

ANKRD28-203, Transcript of ankyrin repeat domain 28, humanhuman

TSL 5

Gene ANKRD28, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-203ENST00000439830 RAD50Q92878 1312 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 TLR3O15455 904 aaKnown RBP29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 DYNC1LI2O43237 492 aaPredicted RBP29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 ZEB2O60315 1214 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 CABYRO75952 493 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 TIMP1P01033 207 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 GSPT1P15170 499 aaKnown RBP29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 ZNF697Q5TEC3 545 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 KIAA1211Q6ZU35 1233 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 FAM126BQ8IXS8 530 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 ENAHQ8N8S7 591 aaPredicted RBP29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 RNPC3Q96LT9 517 aaKnown RBP29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 IL25Q9H293 177 aa29.54■■■□□ 2.32
ANKRD28-203ENST00000439830 PTGS1P23219 599 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 EPHB4P54760 987 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 RPS6P62753 249 aaKnown RBP29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 USH1GQ495M9 461 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 ASPRV1Q53RT3 343 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 MPHOSPH6Q99547 160 aaKnown RBP29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 CPVLQ9H3G5 476 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 ZSWIM5Q9P217 1185 aa29.53■■■□□ 2.32
ANKRD28-203ENST00000439830 UBAC1Q9BSL1 405 aa29.52■■■□□ 2.32
ANKRD28-203ENST00000439830 UBA5Q9GZZ9 404 aa29.52■■■□□ 2.32
ANKRD28-203ENST00000439830 SMAD3P84022 425 aaKnown RBP29.51■■■□□ 2.31
ANKRD28-203ENST00000439830 CDC37Q16543 378 aaPredicted RBP29.51■■■□□ 2.31
ANKRD28-203ENST00000439830 DUSP28Q4G0W2 176 aa29.51■■■□□ 2.31
ANKRD28-203ENST00000439830 SLC17A8Q8NDX2 589 aa29.51■■■□□ 2.31
ANKRD28-203ENST00000439830 PDE4DQ08499 809 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 TMEM63BQ5T3F8 832 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 MFSD5Q6N075 450 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 DNERQ8NFT8 737 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 WDR11Q9BZH6 1224 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 SCN10AQ9Y5Y9 1956 aa29.5■■■□□ 2.31
ANKRD28-203ENST00000439830 IRX6P78412 446 aaPredicted RBP29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 ITGA7Q13683 1181 aa29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 SLC43A3Q8NBI5 491 aa29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 FAM161BQ96MY7 647 aa29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 GUCD1Q96NT3 240 aa29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 SEZ6LQ9BYH1 1024 aa29.49■■■□□ 2.31
ANKRD28-203ENST00000439830 ABCB11O95342 1321 aa29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 RBM47A0AV96 593 aaKnown RBP29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 CD4P01730 458 aa29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 PARP1P09874 1014 aaKnown RBP29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 PPIGQ13427 754 aaKnown RBP eCLIP29.48■■■□□ 2.318e-9■□□□□ 9.9
ANKRD28-203ENST00000439830 ADGRF4Q8IZF3 695 aa29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 RUFY2Q8WXA3 655 aa29.48■■■□□ 2.31
ANKRD28-203ENST00000439830 CDH23Q9H251 3354 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 B4DLN1 442 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 DHX16O60231 1041 aaKnown RBP29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 EDNRBP24530 442 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 MRPL12P52815 198 aaKnown RBP29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 IFIT1BQ5T764 474 aaKnown RBP29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 RGS22Q8NE09 1264 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 PPP1R12CQ9BZL4 782 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 MAF1Q9H063 256 aa29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 BAZ2BQ9UIF8 2168 aaKnown RBP29.47■■■□□ 2.31
ANKRD28-203ENST00000439830 PPP2R5BQ15173 497 aa29.46■■■□□ 2.31
ANKRD28-203ENST00000439830 TMEM199Q8N511 208 aa29.46■■■□□ 2.31
ANKRD28-203ENST00000439830 CPT1AP50416 773 aa29.45■■■□□ 2.31
ANKRD28-203ENST00000439830 SCFD2Q8WU76 684 aa29.45■■■□□ 2.31
ANKRD28-203ENST00000439830 POLR3EQ9NVU0 708 aa29.45■■■□□ 2.31
ANKRD28-203ENST00000439830 GRIN2DO15399 1336 aa29.45■■■□□ 2.3
ANKRD28-203ENST00000439830 GBF1Q92538 1859 aa29.44■■■□□ 2.3
ANKRD28-203ENST00000439830 PSMC6P62333 389 aa29.44■■■□□ 2.3
ANKRD28-203ENST00000439830 TRDNQ13061 729 aa29.44■■■□□ 2.3
ANKRD28-203ENST00000439830 QRICH1Q2TAL8 776 aa29.44■■■□□ 2.3
ANKRD28-203ENST00000439830 OR6J1Q8NGC5 347 aa29.44■■■□□ 2.3
ANKRD28-203ENST00000439830 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.44■■■□□ 2.37e-7■□□□□ 9.9
ANKRD28-203ENST00000439830 MYH7BA7E2Y1 1941 aa29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 MYO9BQ13459 2157 aa29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 NKRFO15226 690 aaKnown RBP eCLIP29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 CSF2RAP15509 400 aa29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 CHMLP26374 656 aa29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 SEC23AQ15436 765 aa29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 U3KPZ7 1027 aaPredicted RBP29.43■■■□□ 2.3
ANKRD28-203ENST00000439830 A0A0C4DFX4 3053 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 BRDTQ58F21 947 aaPredicted RBP29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 CYB5R4Q7L1T6 521 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 FBXO11Q86XK2 927 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 MCF2L2Q86YR7 1114 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 SEMA6BQ9H3T3 888 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 HIPK3Q9H422 1215 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 JMJD4Q9H9V9 463 aa29.42■■■□□ 2.3
ANKRD28-203ENST00000439830 CYP2C18P33260 490 aa29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 PURAQ00577 322 aaKnown RBP29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 PSRC1Q6PGN9 363 aaPredicted RBP29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 VAT1LQ9HCJ6 419 aa29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 MRPL11Q9Y3B7 192 aaKnown RBP29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 CUL9Q8IWT3 2517 aa29.41■■■□□ 2.3
ANKRD28-203ENST00000439830 UNC80Q8N2C7 3258 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 TANC1Q9C0D5 1861 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 TMEM265A0A087WTH1 108 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 B4GALT4O60513 344 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 MYL3P08590 195 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 CYP21A2P08686 494 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 PTH1RQ03431 593 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 SYTL5Q8TDW5 730 aaPredicted RBP29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 TRPV6Q9H1D0 765 aa29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 TTYH1Q9H313 450 aaPredicted RBP29.4■■■□□ 2.3
ANKRD28-203ENST00000439830 GPHNQ9NQX3 736 aaPredicted RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms