RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CHMP4BP1P59074 171 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 LMNB2Q03252 620 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 SLFN5Q08AF3 891 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 KRT72Q14CN4 511 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 WDR43Q15061 677 aaKnown RBP eCLIP6.33□□□□□ -1.4
RFC3-202ENST00000434425 MUM1Q2TAK8 710 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 TJAP1Q5JTD0 557 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 IRGCQ6NXR0 463 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 TCEAL8Q8IYN2 117 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 MYOCDQ8IZQ8 938 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 IL17REQ8NFR9 667 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 NKX2-3Q8TAU0 364 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 ADAM32Q8TC27 787 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 CHMP4CQ96CF2 233 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
RFC3-202ENST00000434425 DEPDC7Q96QD5 511 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 CENPOQ9BU64 300 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 MMTAG2Q9BU76 263 aaKnown RBP6.33□□□□□ -1.4
RFC3-202ENST00000434425 AP1M1Q9BXS5 423 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 TSPYL1Q9H0U9 437 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 UNC93B1Q9H1C4 597 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 TAF1DQ9H5J8 278 aaPredicted RBP6.33□□□□□ -1.4
RFC3-202ENST00000434425 MED4Q9NPJ6 270 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 VTI1BQ9UEU0 232 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 PCDHB9Q9Y5E1 797 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 PCDHGB7Q9Y5F8 929 aa6.33□□□□□ -1.4
RFC3-202ENST00000434425 CNTNAP1P78357 1384 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 A0A087WZG4 1122 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 K7ENM7 598 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 STXBP3O00186 592 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 AKAP10O43572 662 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 AKR1B10O60218 316 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 A1BGP04217 495 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 COL11A2P13942 1736 aaPredicted RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 SMARCA1P28370 1054 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SERPINB3P29508 390 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 CTCFP49711 727 aaPredicted RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 RAB27AP51159 221 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 PTPN5P54829 565 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 PTK2Q05397 1052 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SWI5Q1ZZU3 235 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 CRTC2Q53ET0 693 aaPredicted RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 HIBCHQ6NVY1 386 aaPredicted RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 OLFM4Q6UX06 510 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 C16orf86Q6ZW13 317 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 MAATS1Q7Z4T9 603 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 MTERF4Q7Z6M4 381 aaKnown RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 ZNF354CQ86Y25 554 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 AFAP1L1Q8TED9 768 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 MAML1Q92585 1016 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 HVCN1Q96D96 273 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SETDB2Q96T68 719 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 CDH19Q9H159 772 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 DBNDD1Q9H9R9 158 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 CYP4F11Q9HBI6 524 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 ANO2Q9NQ90 1003 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 RASSF1Q9NS23 344 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SMC4Q9NTJ3 1288 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 ZIM2Q9NZV7 527 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 C6orf203Q9P0P8 240 aaPredicted RBP6.32□□□□□ -1.4
RFC3-202ENST00000434425 GTF2IRD1Q9UHL9 959 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SLC30A1Q9Y6M5 507 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 SCN4AP35499 1836 aa6.32□□□□□ -1.4
RFC3-202ENST00000434425 LTBP3Q9NS15 1303 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 TREHO43280 583 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 KIAA0754O94854 1291 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 RASGRP1O95267 797 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 MMEP08473 750 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 SFTPCP11686 197 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 RBM5P52756 815 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFC3-202ENST00000434425 APBA1Q02410 837 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 NCOA4Q13772 614 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 SLMAPQ14BN4 828 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 WTAPQ15007 396 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 STYK1Q6J9G0 422 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 TOGARAM2Q6ZUX3 1019 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 SH3BP5LQ7L8J4 393 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 CATSPER4Q7RTX7 472 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 TAX1BP1Q86VP1 789 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 DDX42Q86XP3 938 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFC3-202ENST00000434425 TTC5Q8N0Z6 440 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 ARL10Q8N8L6 244 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.31□□□□□ -1.4
RFC3-202ENST00000434425 KCT2Q8NC54 265 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.31□□□□□ -1.4
RFC3-202ENST00000434425 IPCEF1Q8WWN9 437 aaPredicted RBP6.31□□□□□ -1.4
RFC3-202ENST00000434425 AIDAQ96BJ3 306 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 MASTLQ96GX5 879 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 STRBPQ96SI9 672 aaKnown RBP6.31□□□□□ -1.4
RFC3-202ENST00000434425 MRPL9Q9BYD2 267 aaKnown RBP6.31□□□□□ -1.4
RFC3-202ENST00000434425 RBCK1Q9BYM8 510 aa6.31□□□□□ -1.4
RFC3-202ENST00000434425 IQCGQ9H095 443 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms