RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CALML3P27482 149 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 PSMC6P62333 389 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 PTH1RQ03431 593 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 KIAA1211Q6ZU35 1233 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 CYB5R4Q7L1T6 521 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 TTYH1Q9H313 450 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-203ENST00000430038 SPC25Q9HBM1 224 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 STXBP5LQ9Y2K9 1186 aa20.06■□□□□ 0.8
CPSF4-203ENST00000430038 RBM47A0AV96 593 aaKnown RBP20.05■□□□□ 0.8
CPSF4-203ENST00000430038 HIP1O00291 1037 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 FPGSQ05932 587 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 FSCN1Q16658 493 aaKnown RBP20.05■□□□□ 0.8
CPSF4-203ENST00000430038 USH1GQ495M9 461 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 RNF207Q6ZRF8 634 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 ADGRF4Q8IZF3 695 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 SLC17A8Q8NDX2 589 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 VTA1Q9NP79 307 aa20.05■□□□□ 0.8
CPSF4-203ENST00000430038 TNKSO95271 1327 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 UMODL1Q5DID0 1318 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 WDR19Q8NEZ3 1342 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 PRUNE2Q8WUY3 3088 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 EDNRBP24530 442 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 SEC23AQ15436 765 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 DUSP28Q4G0W2 176 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 STAG2Q8N3U4 1231 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 PPP1R13LQ8WUF5 828 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.04■□□□□ 0.81e-8■■□□□ 14.1
CPSF4-203ENST00000430038 COL20A1Q9P218 1284 aa20.04■□□□□ 0.8
CPSF4-203ENST00000430038 CSF2RAP15509 400 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 CHMLP26374 656 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 CDC37Q16543 378 aaPredicted RBP20.03■□□□□ 0.8
CPSF4-203ENST00000430038 IMMTQ16891 758 aaKnown RBP20.03■□□□□ 0.8
CPSF4-203ENST00000430038 GPATCH4Q5T3I0 446 aaKnown RBP20.03■□□□□ 0.8
CPSF4-203ENST00000430038 MFSD5Q6N075 450 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 COPS5Q92905 334 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 VWCEQ96DN2 955 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 PPP1R12CQ9BZL4 782 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 AP5M1Q9H0R1 490 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 TRPV6Q9H1D0 765 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 SEMA6BQ9H3T3 888 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 JMJD4Q9H9V9 463 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 SENP2Q9HC62 589 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 Q9Y3F1 56 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 KIAA1217Q5T5P2 1943 aa20.03■□□□□ 0.8
CPSF4-203ENST00000430038 MYO9BQ13459 2157 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 RBAK-RBAKDNI3L0D1 243 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 ACRP10323 421 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 CYP2C18P33260 490 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 SMAD3P84022 425 aaKnown RBP20.02■□□□□ 0.8
CPSF4-203ENST00000430038 ITGA7Q13683 1181 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 TMEM240Q5SV17 173 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 RNPC3Q96LT9 517 aaKnown RBP20.02■□□□□ 0.8
CPSF4-203ENST00000430038 KAT14Q9H8E8 782 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 ADD3Q9UEY8 706 aaKnown RBP20.02■□□□□ 0.8
CPSF4-203ENST00000430038 SCN10AQ9Y5Y9 1956 aa20.02■□□□□ 0.8
CPSF4-203ENST00000430038 OPLAHO14841 1288 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 ARIH2O95376 493 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 CYP21A2P08686 494 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 QRICH1Q2TAL8 776 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 TAAR1Q96RJ0 339 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 CDX2Q99626 313 aaPredicted RBP20.01■□□□□ 0.79
CPSF4-203ENST00000430038 CTNNA3Q9UI47 895 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 SCN5AQ14524 2016 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 GBF1Q92538 1859 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
CPSF4-203ENST00000430038 MYH7BA7E2Y1 1941 aa20■□□□□ 0.79
CPSF4-203ENST00000430038 GRXCR1A8MXD5 290 aa20■□□□□ 0.79
CPSF4-203ENST00000430038 B4GALT4O60513 344 aa20■□□□□ 0.79
CPSF4-203ENST00000430038 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
CPSF4-203ENST00000430038 COL9A3Q14050 684 aaPredicted RBP20■□□□□ 0.79
CPSF4-203ENST00000430038 STOX1Q6ZVD7 989 aa20■□□□□ 0.79
CPSF4-203ENST00000430038 RGS22Q8NE09 1264 aa20■□□□□ 0.79
CPSF4-203ENST00000430038 PURAQ00577 322 aaKnown RBP19.99■□□□□ 0.79
CPSF4-203ENST00000430038 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 ZNF697Q5TEC3 545 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 RASIP1Q5U651 963 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 ZNF365Q70YC5 407 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 SYTL5Q8TDW5 730 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-203ENST00000430038 KRT23Q9C075 422 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 MAD2L2Q9UI95 211 aa19.99■□□□□ 0.79
CPSF4-203ENST00000430038 CHD9Q3L8U1 2897 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 TRIP12Q14669 1992 aaPredicted RBP19.98■□□□□ 0.79
CPSF4-203ENST00000430038 LOC102724159A0A0B4J2E5 919 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 CABYRO75952 493 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 PDE4DQ08499 809 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 PWP2Q15269 919 aaKnown RBP19.98■□□□□ 0.79
CPSF4-203ENST00000430038 ASPRV1Q53RT3 343 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 DNERQ8NFT8 737 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 WNT8AQ9H1J5 351 aa19.98■□□□□ 0.79
CPSF4-203ENST00000430038 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
CPSF4-203ENST00000430038 PBX2P40425 430 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 NT5C2P49902 561 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 CCL23P55773 120 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
CPSF4-203ENST00000430038 CCDC62Q6P9F0 684 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 CHST3Q7LGC8 479 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms