RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 DGKHQ86XP1 1220 aa14.08□□□□□ -0.16
TTC3-208ENST00000428693 ZSCAN10Q96SZ4 725 aaPredicted RBP14.08□□□□□ -0.16
TTC3-208ENST00000428693 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.16
TTC3-208ENST00000428693 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
TTC3-208ENST00000428693 GNEQ9Y223 722 aaKnown RBP14.08□□□□□ -0.16
TTC3-208ENST00000428693 MYL3P08590 195 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 PSMC6P62333 389 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 RPS6P62753 249 aaKnown RBP14.07□□□□□ -0.16
TTC3-208ENST00000428693 ITGA7Q13683 1181 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 TMEM199Q8N511 208 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 DSCC1Q9BVC3 393 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 KRT23Q9C075 422 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
TTC3-208ENST00000428693 PNMA2Q9UL42 364 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 TNKSO95271 1327 aa14.07□□□□□ -0.16
TTC3-208ENST00000428693 B4DLN1 442 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 DLL1O00548 723 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CTAGE5O15320 804 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CABYRO75952 493 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 ACRP10323 421 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CSF2RAP15509 400 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CYP2C18P33260 490 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CDK7P50613 346 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 MRPL12P52815 198 aaKnown RBP14.06□□□□□ -0.16
TTC3-208ENST00000428693 SMAD3P84022 425 aaKnown RBP14.06□□□□□ -0.16
TTC3-208ENST00000428693 PPIGQ13427 754 aaKnown RBP eCLIP14.06□□□□□ -0.161e-6■■■□□ 15.3
TTC3-208ENST00000428693 CDC37Q16543 378 aaPredicted RBP14.06□□□□□ -0.16
TTC3-208ENST00000428693 FAM109BQ6ICB4 259 aaPredicted RBP14.06□□□□□ -0.16
TTC3-208ENST00000428693 MFSD5Q6N075 450 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 FAM126BQ8IXS8 530 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CLEC4DQ8WXI8 215 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 ZSWIM5Q9P217 1185 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
TTC3-208ENST00000428693 PARP1P09874 1014 aaKnown RBP14.05□□□□□ -0.16
TTC3-208ENST00000428693 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 TRDNQ13061 729 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 PPP2R5BQ15173 497 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 DUSP28Q4G0W2 176 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
TTC3-208ENST00000428693 FAM47CQ5HY64 1035 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
TTC3-208ENST00000428693 TTC22Q5TAA0 569 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 ADGRF4Q8IZF3 695 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 ENAHQ8N8S7 591 aaPredicted RBP14.05□□□□□ -0.16
TTC3-208ENST00000428693 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.05□□□□□ -0.161e-8■□□□□ 9.5
TTC3-208ENST00000428693 TRPV6Q9H1D0 765 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 SEMA6BQ9H3T3 888 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 HIPK3Q9H422 1215 aa14.05□□□□□ -0.16
TTC3-208ENST00000428693 LCTP09848 1927 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 TXNP10599 105 aaKnown RBP14.04□□□□□ -0.16
TTC3-208ENST00000428693 PDE4AP27815 886 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 CPT1AP50416 773 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 CCL23P55773 120 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 ASPRV1Q53RT3 343 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 RUFY2Q8WXA3 655 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 CDX2Q99626 313 aaPredicted RBP14.04□□□□□ -0.16
TTC3-208ENST00000428693 Q9Y3F1 56 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 A0A0C4DFX4 3053 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 RAD50Q92878 1312 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
TTC3-208ENST00000428693 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.03□□□□□ -0.16
TTC3-208ENST00000428693 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.03□□□□□ -0.16
TTC3-208ENST00000428693 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
TTC3-208ENST00000428693 QRICH1Q2TAL8 776 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 SEPT14Q6ZU15 432 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 FBXO11Q86XK2 927 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 MORC4Q8TE76 937 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 PPP1R13LQ8WUF5 828 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 MYLIPQ8WY64 445 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 TBC1D5Q92609 795 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 COPS5Q92905 334 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 IL25Q9H293 177 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 POLR3EQ9NVU0 708 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 ABCB11O95342 1321 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
TTC3-208ENST00000428693 ERICH2A1L162 156 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 B4GALT4O60513 344 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 CFBP00751 764 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 CD4P01730 458 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 FOSL2P15408 326 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 NT5C2P49902 561 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 NKX3-2P78367 333 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 PSRC1Q6PGN9 363 aaPredicted RBP14.02□□□□□ -0.17
TTC3-208ENST00000428693 CHST3Q7LGC8 479 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 RALYLQ86SE5 291 aaKnown RBP14.02□□□□□ -0.17
TTC3-208ENST00000428693 MCF2L2Q86YR7 1114 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 DNERQ8NFT8 737 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 TTYH1Q9H313 450 aaPredicted RBP14.02□□□□□ -0.17
TTC3-208ENST00000428693 MRPL11Q9Y3B7 192 aaKnown RBP14.02□□□□□ -0.17
TTC3-208ENST00000428693 MYH6P13533 1939 aa14.02□□□□□ -0.17
TTC3-208ENST00000428693 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
TTC3-208ENST00000428693 UMODL1Q5DID0 1318 aa14.01□□□□□ -0.17
TTC3-208ENST00000428693 LOC102724159A0A0B4J2E5 919 aa14.01□□□□□ -0.17
TTC3-208ENST00000428693 GRXCR1A8MXD5 290 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms