RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TBCKQ8TEA7 893 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 COG1Q8WTW3 980 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 GNPATO15228 680 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 ACTN2P35609 894 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 COA7Q96BR5 231 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 ZNHIT6Q9NWK9 470 aaKnown RBP16.05■□□□□ 0.16
ERCC3-202ENST00000426778 KRT86O43790 486 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 IPO7O95373 1038 aaKnown RBP16.04■□□□□ 0.16
ERCC3-202ENST00000426778 OR52Z1P0C646 297 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
ERCC3-202ENST00000426778 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 TTYH3Q9C0H2 523 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 THAP9Q9H5L6 903 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 RSPH14Q9UHP6 348 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 FEZ2Q9UHY8 353 aaPredicted RBP16.04■□□□□ 0.16
ERCC3-202ENST00000426778 TULP2O00295 520 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 RASA1P20936 1047 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
ERCC3-202ENST00000426778 LEKR1Q6ZMV7 388 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
ERCC3-202ENST00000426778 MYO1AQ9UBC5 1043 aa16.04■□□□□ 0.16
ERCC3-202ENST00000426778 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 SYF2O95926 243 aaKnown RBP16.03■□□□□ 0.16
ERCC3-202ENST00000426778 RRP36Q96EU6 259 aaKnown RBP16.03■□□□□ 0.16
ERCC3-202ENST00000426778 CCDC42Q96M95 316 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
ERCC3-202ENST00000426778 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
ERCC3-202ENST00000426778 BUB1O43683 1085 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 CCNE1P24864 410 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
ERCC3-202ENST00000426778 GGCXP38435 758 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 NFRKBQ6P4R8 1299 aa16.03■□□□□ 0.16
ERCC3-202ENST00000426778 DLEC1Q9Y238 1755 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 USP17L5A8MUK1 530 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 MYO1CO00159 1063 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 TDP2O95551 362 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 KRT83P78385 493 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
ERCC3-202ENST00000426778 KCNB1Q14721 858 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 DNAJC21Q5F1R6 531 aaKnown RBP16.02■□□□□ 0.16
ERCC3-202ENST00000426778 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 ARHGAP20Q9P2F6 1191 aa16.02■□□□□ 0.16
ERCC3-202ENST00000426778 MYMKA6NI61 221 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 SLC37A4O43826 429 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.15
ERCC3-202ENST00000426778 KIF5AQ12840 1032 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.15
ERCC3-202ENST00000426778 PTPROQ16827 1216 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 CLEC4GQ6UXB4 293 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 RRAGAQ7L523 313 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 LRRC47Q8N1G4 583 aaKnown RBP16.02■□□□□ 0.15
ERCC3-202ENST00000426778 GOLGA5Q8TBA6 731 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 EYA3Q99504 573 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 EHD4Q9H223 541 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 DEF6Q9H4E7 631 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.15
ERCC3-202ENST00000426778 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.15
ERCC3-202ENST00000426778 SSBP05455 408 aaKnown RBP eCLIP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 EIF4A3P38919 411 aaKnown RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 KCNK18Q7Z418 384 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 SECISBP2LQ93073 1101 aaKnown RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 HPCAL4Q9UM19 191 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 ZBED6P86452 979 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 ARID5AQ03989 594 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 LRRC1Q9BTT6 524 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 IFIH1Q9BYX4 1025 aaKnown RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 RAD21O60216 631 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 CDK8P49336 464 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 NAP1L1P55209 391 aaKnown RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 GFPT1Q06210 699 aaPredicted RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 PICALMQ13492 652 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 TUBB2AQ13885 445 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 MEA1Q16626 185 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 PAPD7Q5XG87 772 aaKnown RBP16.01■□□□□ 0.15
ERCC3-202ENST00000426778 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 DNAAF5Q86Y56 855 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 TUBB2BQ9BVA1 445 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 GBP3Q9H0R5 595 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 KIAA1551Q9HCM1 1747 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
ERCC3-202ENST00000426778 LRRC53A6NM62 1247 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 BTDP43251 543 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 SPA17Q15506 151 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 UBE2SQ16763 222 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 MUM1L1Q5H9M0 696 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 WDR93Q6P2C0 686 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 DHTKD1Q96HY7 919 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms