RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 ACER1Q8TDN7 264 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 C12orf42Q96LP6 360 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 PRR12Q9ULL5 1215 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 PDHXO00330 501 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 NOP56O00567 594 aaKnown RBP8.19□□□□□ -1.1
LSM8-204ENST00000424702 PPP6R2O75170 966 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 UBXN2AP68543 259 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 LETM2Q2VYF4 491 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 JAKMIP3Q5VZ66 844 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 WWC2Q6AWC2 1192 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 XRRA1Q6P2D8 792 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 KCNV1Q6PIU1 500 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 DTHD1Q6ZMT9 781 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 GIMAP8Q8ND71 665 aaPredicted RBP8.19□□□□□ -1.1
LSM8-204ENST00000424702 SOCS4Q8WXH5 440 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 FERMT2Q96AC1 680 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 HHIPL1Q96JK4 782 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 TRERF1Q96PN7 1200 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 AP5M1Q9H0R1 490 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 RAVER2Q9HCJ3 691 aaKnown RBP8.19□□□□□ -1.1
LSM8-204ENST00000424702 SCAF8Q9UPN6 1271 aaKnown RBP8.19□□□□□ -1.1
LSM8-204ENST00000424702 SAMM50Q9Y512 469 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 TLL2Q9Y6L7 1015 aa8.19□□□□□ -1.1
LSM8-204ENST00000424702 CDK11BP21127 795 aaKnown RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 DSG3P32926 999 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 MAP2K2P36507 400 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 RGS2P41220 211 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 TYRO3Q06418 890 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 HAUS3Q68CZ6 603 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 NSUN6Q8TEA1 469 aaKnown RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 TRIM5Q9C035 493 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 CNTNAP1P78357 1384 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 KIF28PB7ZC32 967 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 NR1I2O75469 434 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 XRCC6P12956 609 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM8-204ENST00000424702 CMA1P23946 247 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 ZNF165P49910 485 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 HERVK_113P62684 666 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 UVSSAQ2YD98 709 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 ZNF784Q8NCA9 323 aaPredicted RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 SHCBP1Q8NEM2 672 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 GTPBP4Q9BZE4 634 aaKnown RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 IL17RBQ9NRM6 502 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 KCNH3Q9ULD8 1083 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 SNCAIPQ9Y6H5 919 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 ICAM1P05362 532 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 TPM3P06753 285 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 PRMT2P55345 433 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 AMPD3Q01432 767 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 EVX2Q03828 476 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 PLEKHH3Q7Z736 793 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 NEK8Q86SG6 692 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 ADGRF4Q8IZF3 695 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 RAET1EQ8TD07 263 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 NUP88Q99567 741 aaPredicted RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
LSM8-204ENST00000424702 ASTN2O75129 1339 aaPredicted RBP8.18□□□□□ -1.1
LSM8-204ENST00000424702 ESYT2A0FGR8 921 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 STRNO43815 780 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 ZNF202O95125 648 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 U2AF2P26368 475 aaKnown RBP eCLIP8.17□□□□□ -1.17e-9■■□□□ 14.2
LSM8-204ENST00000424702 SETQ01105 290 aaPredicted RBP8.17□□□□□ -1.1
LSM8-204ENST00000424702 KRT79Q5XKE5 535 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 STXBP4Q6ZWJ1 553 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 CREBRFQ8IUR6 639 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 SMARCE1Q969G3 411 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 CPVLQ9H3G5 476 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 TACC3Q9Y6A5 838 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 SMTNL1A8MU46 457 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 BIN1O00499 593 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 KIF20AO95235 890 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 TMEM132AQ24JP5 1023 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 ANO6Q4KMQ2 910 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 METTL16Q86W50 562 aaKnown RBP8.17□□□□□ -1.1
LSM8-204ENST00000424702 CLEC10AQ8IUN9 316 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 ANKRD20A12PQ8NF67 263 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 PALM3A6NDB9 673 aaPredicted RBP8.17□□□□□ -1.1
LSM8-204ENST00000424702 LAD1O00515 517 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 CCNT1O60563 726 aaKnown RBP8.17□□□□□ -1.1
LSM8-204ENST00000424702 TPM2P07951 284 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 PFKFB1P16118 471 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 INF2Q27J81 1249 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 OXER1Q8TDS5 423 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 DHX58Q96C10 678 aa8.17□□□□□ -1.1
LSM8-204ENST00000424702 ASCC2Q9H1I8 757 aaPredicted RBP8.17□□□□□ -1.1
LSM8-204ENST00000424702 FER1L6Q2WGJ9 1857 aa8.16□□□□□ -1.1
LSM8-204ENST00000424702 BACH1O14867 736 aa8.16□□□□□ -1.1
LSM8-204ENST00000424702 IRF6O14896 467 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms