RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ADGRE1Q14246 886 aa19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 SYDE2Q5VT97 1194 aa19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 EVI5LQ96CN4 794 aa19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 ALDH8A1Q9H2A2 487 aaPredicted RBP19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 POLR3EQ9NVU0 708 aa19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 YBX2Q9Y2T7 364 aaKnown RBP19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 SPTBN5Q9NRC6 3674 aaKnown RBP19.89■□□□□ 0.78
UPF3AP3-201ENST00000420996 TNFRSF10AO00220 468 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 SUPT20HL2P0C7V6 817 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 TOP1P11387 765 aaKnown RBP19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 WDR11Q9BZH6 1224 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 HELLSQ9NRZ9 838 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 TCP11L1Q9NUJ3 509 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 SLC4A7Q9Y6M7 1214 aa19.89■□□□□ 0.77
UPF3AP3-201ENST00000420996 RBM47A0AV96 593 aaKnown RBP19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 NFIBO00712 420 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 IGFBP4P22692 258 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 TMEM47Q9BQJ4 181 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 TOMM22Q9NS69 142 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 THEGQ9P2T0 379 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 PNMA2Q9UL42 364 aa19.88■□□□□ 0.77
UPF3AP3-201ENST00000420996 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 FGAP02671 866 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 CPT1AP50416 773 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 PURAQ00577 322 aaKnown RBP19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 VWCEQ96DN2 955 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 SCLYQ96I15 445 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 ASB2Q96Q27 587 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 PCDHA11Q9Y5I1 949 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 TTC28Q96AY4 2481 aa19.87■□□□□ 0.77
UPF3AP3-201ENST00000420996 TNKSO95271 1327 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 FRMPD2Q68DX3 1309 aaPredicted RBP19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 PFKMP08237 780 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 RABGGTBP53611 331 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 CCDC85BQ15834 202 aaPredicted RBP19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 TICAM2Q86XR7 235 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 CLEC4DQ8WXI8 215 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 MTG1Q9BT17 334 aaPredicted RBP19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 TRMT13Q9NUP7 481 aaKnown RBP19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 CHD9Q3L8U1 2897 aa19.86■□□□□ 0.77
UPF3AP3-201ENST00000420996 SCN10AQ9Y5Y9 1956 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 NKRFO15226 690 aaKnown RBP eCLIP19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 MYL3P08590 195 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 PDHBP11177 359 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 CYP2C9P11712 490 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 CALML3P27482 149 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 MRPS5P82675 430 aaKnown RBP19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 MCMDC2Q4G0Z9 681 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 BRDTQ58F21 947 aaPredicted RBP19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 PPP2R2DQ66LE6 453 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 RNF207Q6ZRF8 634 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 OR6J1Q8NGC5 347 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 TTC14Q96N46 770 aa19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 GPHNQ9NQX3 736 aaPredicted RBP19.85■□□□□ 0.77
UPF3AP3-201ENST00000420996 RAD50Q92878 1312 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 ZBBXA8MT70 800 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 ATP2A2P16615 1042 aaKnown RBP19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 PDE1AP54750 535 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 PDE4DQ08499 809 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 SLC30A10Q6XR72 485 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 FAM227BQ96M60 508 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 MPHOSPH6Q99547 160 aaKnown RBP19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 SCN5AQ14524 2016 aa19.84■□□□□ 0.77
UPF3AP3-201ENST00000420996 ZMYM6O95789 1325 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 A0A0D9SFI3 127 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 KPNA6O60684 536 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 HSPD1P10809 573 aaKnown RBP19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 MYOGP15173 224 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 EDNRBP24530 442 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 RPS6P62753 249 aaKnown RBP19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 ZNF543Q08ER8 600 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 TTLL4Q14679 1199 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 PPP2R5BQ15173 497 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 NBPF20Q3BBV1 942 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 DNERQ8NFT8 737 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 SCFD2Q8WU76 684 aa19.83■□□□□ 0.77
UPF3AP3-201ENST00000420996 WDR19Q8NEZ3 1342 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 A6NJR5 290 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 SNHG28P0DPA3 235 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 PCP11498 1178 aaKnown RBP19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 RFC2P35250 354 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 NFRKBQ6P4R8 1299 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 DEFB128Q7Z7B8 93 aa19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 TSPYL2Q9H2G4 693 aaPredicted RBP19.82■□□□□ 0.76
UPF3AP3-201ENST00000420996 B4DLN1 442 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 ACTN1P12814 892 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 MRPL12P52815 198 aaKnown RBP19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 PTPN11Q06124 597 aaPredicted RBP19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 FAM47CQ5HY64 1035 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 TMEM67Q5HYA8 995 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 MFSD6Q6ZSS7 791 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 ADAMTS19Q8TE59 1207 aa19.81■□□□□ 0.76
UPF3AP3-201ENST00000420996 PITPNM1O00562 1244 aa19.8■□□□□ 0.76
UPF3AP3-201ENST00000420996 HAND2P61296 217 aa19.8■□□□□ 0.76
UPF3AP3-201ENST00000420996 RETREG2Q8NC44 543 aa19.8■□□□□ 0.76
UPF3AP3-201ENST00000420996 RGS22Q8NE09 1264 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms