RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 SYNRGQ9UMZ2 1314 aa13.02□□□□□ -0.33
RFFL-204ENST00000414419 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 ADAMTS4O75173 837 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 DDAH1O94760 285 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 CALM1P0DP23 149 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 CALM2P0DP24 149 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 CALM3P0DP25 149 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 KRT32Q14532 448 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
RFFL-204ENST00000414419 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
RFFL-204ENST00000414419 VTI1AQ96AJ9 217 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 ASTN1O14525 1302 aa13.01□□□□□ -0.33
RFFL-204ENST00000414419 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
RFFL-204ENST00000414419 LRRC37A2A6NM11 1700 aa13□□□□□ -0.33
RFFL-204ENST00000414419 A0A1W2PQ45 241 aaPredicted RBP13□□□□□ -0.33
RFFL-204ENST00000414419 A0A1W2PQY0 241 aa13□□□□□ -0.33
RFFL-204ENST00000414419 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
RFFL-204ENST00000414419 REC8O95072 547 aa13□□□□□ -0.33
RFFL-204ENST00000414419 CFBP00751 764 aa13□□□□□ -0.33
RFFL-204ENST00000414419 LIFRP42702 1097 aa13□□□□□ -0.33
RFFL-204ENST00000414419 GNAQP50148 359 aa13□□□□□ -0.33
RFFL-204ENST00000414419 ACLYP53396 1101 aa13□□□□□ -0.33
RFFL-204ENST00000414419 GJA9P57773 515 aa13□□□□□ -0.33
RFFL-204ENST00000414419 KCNA10Q16322 511 aa13□□□□□ -0.33
RFFL-204ENST00000414419 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
RFFL-204ENST00000414419 MORC4Q8TE76 937 aa13□□□□□ -0.33
RFFL-204ENST00000414419 MTMR8Q96EF0 704 aa13□□□□□ -0.33
RFFL-204ENST00000414419 GLT1D1Q96MS3 346 aa13□□□□□ -0.33
RFFL-204ENST00000414419 PIGSQ96S52 555 aa13□□□□□ -0.33
RFFL-204ENST00000414419 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
RFFL-204ENST00000414419 RIOX1Q9H6W3 641 aa13□□□□□ -0.33
RFFL-204ENST00000414419 STARD7Q9NQZ5 370 aa13□□□□□ -0.33
RFFL-204ENST00000414419 PDGFCQ9NRA1 345 aa13□□□□□ -0.33
RFFL-204ENST00000414419 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
RFFL-204ENST00000414419 DDX49Q9Y6V7 483 aaKnown RBP13□□□□□ -0.33
RFFL-204ENST00000414419 PNMA6FA0A0J9YX94 578 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 ADCY6O43306 1168 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 ZEB2O60315 1214 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 ASGR1P07306 291 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 HMGB1P09429 215 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 SMPD1P17405 629 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 FGD1P98174 961 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 TSGA10IPQ3SY00 556 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 TAPT1Q6NXT6 567 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 SYTL5Q8TDW5 730 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 PIBF1Q8WXW3 757 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 TBC1D5Q92609 795 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 LBHD1Q9BQE6 289 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 MYL10Q9BUA6 226 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 UPF3AQ9H1J1 476 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 GPHNQ9NQX3 736 aaPredicted RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 MAP3K20Q9NYL2 800 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
RFFL-204ENST00000414419 Q9Y3F1 56 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 KIAA1217Q5T5P2 1943 aa12.99□□□□□ -0.33
RFFL-204ENST00000414419 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 ARHGEF16Q5VV41 709 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 IWS1Q96ST2 819 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 RMDN3Q96TC7 470 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
RFFL-204ENST00000414419 GNEQ9Y223 722 aaKnown RBP12.98□□□□□ -0.33
RFFL-204ENST00000414419 MYH7BA7E2Y1 1941 aa12.98□□□□□ -0.33
RFFL-204ENST00000414419 ELP1O95163 1332 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 GCOM1H8Y6P7 765 aaPredicted RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 CYTH3O43739 400 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 PPP1R11O60927 126 aaPredicted RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 POLR2MP0CAP2 368 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 RXRAP19793 462 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 EDNRBP24530 442 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 MAGEA10P43363 369 aaPredicted RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 BEX3Q00994 111 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 TLE2Q04725 743 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 SNX17Q15036 470 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 STXBP2Q15833 593 aa12.97□□□□□ -0.33
RFFL-204ENST00000414419 FSCN1Q16658 493 aaKnown RBP12.97□□□□□ -0.33
RFFL-204ENST00000414419 DUSP28Q4G0W2 176 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms