RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 AGBL1Q96MI9 1066 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 PARK7Q99497 189 aaKnown RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 PCDHA1Q9Y5I3 950 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 STXBP3O00186 592 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 PEX10O60683 326 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 ALDH1A1P00352 501 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 Q3C1V9 767 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 FBXO11Q86XK2 927 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 FAM177A1Q8N128 213 aaPredicted RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 RGS22Q8NE09 1264 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
DDB1-202ENST00000414411 COA7Q96BR5 231 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 ALG1Q9BT22 464 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 NUP62CLQ9H1M0 184 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
DDB1-202ENST00000414411 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 GJB4Q9NTQ9 266 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 PNMA2Q9UL42 364 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 RIPK3Q9Y572 518 aa11.39□□□□□ -0.59
DDB1-202ENST00000414411 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 GOLGA6L4A6NEF3 574 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 CA12O43570 354 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 TLR2O60603 784 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 PYGBP11216 843 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 STAT3P40763 770 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 TRAF1Q13077 416 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
DDB1-202ENST00000414411 CPXCR1Q8N123 301 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 FBXO18Q8NFZ0 1043 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 SMCR8Q8TEV9 937 aaPredicted RBP11.38□□□□□ -0.59
DDB1-202ENST00000414411 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
DDB1-202ENST00000414411 MORF4L1Q9UBU8 362 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 USP25Q9UHP3 1055 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 CFAP45Q9UL16 551 aa11.38□□□□□ -0.59
DDB1-202ENST00000414411 OPLAHO14841 1288 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 ZNF500O60304 480 aaPredicted RBP11.37□□□□□ -0.59
DDB1-202ENST00000414411 CCDC192P0DO97 292 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 BCRP11274 1271 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 NPY5RQ15761 445 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 C17orf99Q6UX52 265 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 HEATR3Q7Z4Q2 680 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 PGBD1Q96JS3 809 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 SPATC1LQ9H0A9 340 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 ZMYND12Q9H0C1 365 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 DACT1Q9NYF0 836 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 CCPG1Q9ULG6 757 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
DDB1-202ENST00000414411 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 ERVK-24P63145 666 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 CRHR2Q13324 411 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 USH1GQ495M9 461 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
DDB1-202ENST00000414411 RIOX2Q8IUF8 465 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 ANKRD13CQ8N6S4 541 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 GPRC5AQ8NFJ5 357 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 CLEC4DQ8WXI8 215 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 C8orf76Q96K31 380 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 PHF20Q9BVI0 1012 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 MOV10L1Q9BXT6 1211 aaKnown RBP11.37□□□□□ -0.59
DDB1-202ENST00000414411 R3HDMLQ9H3Y0 253 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 ZFYVE28Q9HCC9 887 aa11.37□□□□□ -0.59
DDB1-202ENST00000414411 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
DDB1-202ENST00000414411 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 STK25O00506 426 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
DDB1-202ENST00000414411 KRT40Q6A162 431 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 RBM43Q6ZSC3 357 aaKnown RBP11.36□□□□□ -0.59
DDB1-202ENST00000414411 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
DDB1-202ENST00000414411 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 RNF186Q9NXI6 227 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 ABCB11O95342 1321 aa11.36□□□□□ -0.59
DDB1-202ENST00000414411 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 ADCY5O95622 1261 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 ALAS1P13196 640 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 FOSBP53539 338 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 NAPAP54920 295 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 GHRHRQ02643 423 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 PLS1Q14651 629 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 TKFCQ3LXA3 575 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 ATL3Q6DD88 541 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 BICD2Q8TD16 824 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
DDB1-202ENST00000414411 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 TNMDQ9H2S6 317 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 CPA4Q9UI42 421 aa11.35□□□□□ -0.59
DDB1-202ENST00000414411 KCNJ14Q9UNX9 436 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms