RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FAM181AQ8N9Y4 354 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 USP7Q93009 1102 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 FBXL18Q96ME1 805 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 LUC7LQ9NQ29 371 aaKnown RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 PAK6Q9NQU5 681 aaPredicted RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 OBP2AQ9NY56 170 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 INTUQ9ULD6 942 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 TNPO3Q9Y5L0 923 aaKnown RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 PRODHO43272 600 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 OPA1O60313 960 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 KPNA6O60684 536 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 EFCAB14O75071 495 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 FBXO21O94952 628 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 CEACAM5P06731 702 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 PABPC1P11940 636 aaKnown RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 TRIM27P14373 513 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 PDE6BP35913 854 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 PMS1P54277 932 aaKnown RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 ETF1P62495 437 aaKnown RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 TMPRSS15P98073 1019 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 RAPGEF1Q13905 1077 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 SLC6A19Q695T7 634 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 NSMFQ6X4W1 530 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 ZNF227Q86WZ6 799 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 SLC7A14Q8TBB6 771 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 OSBP2Q969R2 916 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 E2F7Q96AV8 911 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 ACSF2Q96CM8 615 aaPredicted RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 DHRS1Q96LJ7 313 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 SENP7Q9BQF6 1050 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 MTFR1LQ9H019 292 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 IFT22Q9H7X7 185 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 SUSD2Q9UGT4 822 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 KLHL3Q9UH77 587 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 NDOR1Q9UHB4 597 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 GTF2IRD1Q9UHL9 959 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 VAV3Q9UKW4 847 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 APOBEC2Q9Y235 224 aaKnown RBP6.26□□□□□ -1.41
LSM5-205ENST00000409952 SNX11Q9Y5W9 270 aa6.26□□□□□ -1.41
LSM5-205ENST00000409952 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 VSTM5A8MXK1 200 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 ZEB2O60315 1214 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 PGRP06401 933 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 ITGAVP06756 1048 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
LSM5-205ENST00000409952 ZNF865P0CJ78 1059 aaPredicted RBP6.25□□□□□ -1.41
LSM5-205ENST00000409952 RAG1P15918 1043 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 YBX3P16989 372 aaKnown RBP eCLIP6.25□□□□□ -1.416e-9■□□□□ 9
LSM5-205ENST00000409952 BPIP17213 487 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 FLT3P36888 993 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 GABREP78334 506 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 PRKCQQ04759 706 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 IFI16Q16666 785 aaKnown RBP6.25□□□□□ -1.41
LSM5-205ENST00000409952 NKPD1Q17RQ9 610 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 GRAMD1BQ3KR37 738 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 PRAMEF13Q5VWM6 474 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 SPACA3Q8IXA5 215 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 GSTCDQ8NEC7 633 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 COG1Q8WTW3 980 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 TMEM87BQ96K49 555 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 PRDM11Q9NQV5 511 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 ADGRE2Q9UHX3 823 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 TAGLN3Q9UI15 199 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 COL17A1Q9UMD9 1497 aaPredicted RBP6.25□□□□□ -1.41
LSM5-205ENST00000409952 TNKSO95271 1327 aa6.25□□□□□ -1.41
LSM5-205ENST00000409952 NEMP1O14524 444 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 MAFGO15525 162 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 EPHX1P07099 455 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 C6orf222P0C671 652 aaPredicted RBP6.24□□□□□ -1.41
LSM5-205ENST00000409952 IGFALSP35858 605 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 TCIRG1Q13488 830 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 PICALMQ13492 652 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 ZNF460Q14592 562 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 ACBD5Q5T8D3 534 aaPredicted RBP6.24□□□□□ -1.41
LSM5-205ENST00000409952 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 ABI1Q8IZP0 508 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 OR2W6PQ8NHA6 318 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 PI4K2BQ8TCG2 481 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 HAUS7Q99871 368 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 SLC52A2Q9HAB3 445 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 IP6K2Q9UHH9 426 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 USP25Q9UHP3 1055 aa6.24□□□□□ -1.41
LSM5-205ENST00000409952 ANGEL1Q9UNK9 670 aaKnown RBP6.24□□□□□ -1.41
LSM5-205ENST00000409952 LAS1LQ9Y4W2 734 aaKnown RBP6.24□□□□□ -1.41
LSM5-205ENST00000409952 TMEM265A0A087WTH1 108 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 CHURC1-FNTBB4DL54 471 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 CAPNS1P04632 268 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 CT47B1P0C2W7 299 aaPredicted RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 JMJD7P0C870 316 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 CD53P19397 219 aa6.23□□□□□ -1.41
LSM5-205ENST00000409952 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
LSM5-205ENST00000409952 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms