RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SIL1Q9H173 461 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 DBNDD1Q9H9R9 158 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 CNNM1Q9NRU3 951 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 ACTR10Q9NZ32 417 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 PFDN2Q9UHV9 154 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 GGA1Q9UJY5 639 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 CDV3Q9UKY7 258 aaKnown RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 PA2G4Q9UQ80 394 aaKnown RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 WASF2Q9Y6W5 498 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 XDHP47989 1333 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 KDM2BQ8NHM5 1336 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 A0A1B0GUL6 1792 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 PNMA6EA0A0J9YXQ4 647 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 A6NHS1 94 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 FZD9O00144 591 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 ECE2O60344 883 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 OFD1O75665 1012 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 STAU1O95793 577 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 NR3C2P08235 984 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 MYL3P08590 195 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 GNAI3P08754 354 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SNRPBP14678 240 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 PCSK2P16519 638 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 VARSP26640 1264 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 CALRP27797 417 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 KCNJ4P48050 445 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SMCPP49901 116 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 GDF10P55107 478 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 RRP1P56182 461 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 KIAA2012Q0VF49 1180 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SEPT6Q14141 434 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 KCTD2Q14681 263 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 MLC1Q15049 377 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 C8orf34Q49A92 452 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 WWC2Q6AWC2 1192 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 ERAP2Q6P179 960 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 TREML4Q6UXN2 200 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 LDHAL6AQ6ZMR3 332 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 TXNRD3Q86VQ6 643 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 DRC7Q8IY82 874 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SDR16C5Q8N3Y7 309 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 FAM169BQ8N8A8 192 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 JMYQ8N9B5 988 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC74AQ96AQ1 378 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 NT5C1AQ9BXI3 368 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 ATP13A2Q9NQ11 1180 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 KCNQ5Q9NR82 932 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 SERTAD1Q9UHV2 236 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 GJA3Q9Y6H8 435 aa5.35□□□□□ -1.55
SF3B1-202ENST00000409915 DICER1Q9UPY3 1922 aaKnown RBP5.35□□□□□ -1.55
SF3B1-202ENST00000409915 MED23Q9ULK4 1368 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 ZNF804BA4D1E1 1349 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 A0A087X0B3 334 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 GLTPD2A6NH11 291 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 A6NJY4 79 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 SRGAP3O43295 1099 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 WFS1O76024 890 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 GNAI2P04899 355 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 SCNN1DP51172 638 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 FAM193AP78312 1265 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 CXCL9Q07325 125 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 MVPQ14764 893 aaKnown RBP5.34□□□□□ -1.55
SF3B1-202ENST00000409915 METTL24Q5JXM2 366 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 C1orf53Q5VUE5 145 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 NXPE4Q6UWF7 544 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 ATG9AQ7Z3C6 839 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 TRIM46Q7Z4K8 759 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 STAG2Q8N3U4 1231 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 TTC16Q8NEE8 873 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 ENOX1Q8TC92 643 aaKnown RBP5.34□□□□□ -1.55
SF3B1-202ENST00000409915 NINJ1Q92982 152 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 SLC10A4Q96EP9 437 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 EYA3Q99504 573 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC94Q9BW85 323 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-202ENST00000409915 CDH19Q9H159 772 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 RRAGCQ9HB90 399 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 UBP1Q9NZI7 540 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 ZNRF3Q9ULT6 936 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 HDAC5Q9UQL6 1122 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 JAG2Q9Y219 1238 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 DAAM1Q9Y4D1 1078 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 SCN9AQ15858 1988 aa5.34□□□□□ -1.55
SF3B1-202ENST00000409915 IRS2Q9Y4H2 1338 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 GOLGA6CA6NDK9 693 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 GOLGA6BA6NDN3 693 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 EYA2O00167 538 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 PSMD14O00487 310 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 DYNC1I1O14576 645 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 SLC26A4O43511 780 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 TCEA3O75764 348 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 F2P00734 622 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 GOLGA6DP0CG33 693 aa5.33□□□□□ -1.56
SF3B1-202ENST00000409915 XRCC6P12956 609 aaKnown RBP eCLIP5.33□□□□□ -1.566e-10■■■■■ 46
SF3B1-202ENST00000409915 GYG1P46976 350 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms