RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 GLT1D1Q96MS3 346 aa22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 LSG1Q9H089 658 aaKnown RBP22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 VAT1LQ9HCJ6 419 aa22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 PDLIM7Q9NR12 457 aa22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 MAD2L2Q9UI95 211 aa22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 Q9Y3F1 56 aa22.87■■□□□ 1.25
TSPAN4-209ENST00000409543 PALM3A6NDB9 673 aaPredicted RBP22.86■■□□□ 1.25
TSPAN4-209ENST00000409543 FBXO11Q86XK2 927 aa22.86■■□□□ 1.25
TSPAN4-209ENST00000409543 MPHOSPH6Q99547 160 aaKnown RBP22.86■■□□□ 1.25
TSPAN4-209ENST00000409543 AP5M1Q9H0R1 490 aa22.86■■□□□ 1.25
TSPAN4-209ENST00000409543 PRDM5Q9NQX1 630 aaPredicted RBP22.86■■□□□ 1.25
TSPAN4-209ENST00000409543 EDNRBP24530 442 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 WTAPQ15007 396 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 CHST3Q7LGC8 479 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 ANKRD33Q7Z3H0 272 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 TLK2Q86UE8 772 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 SKAP1Q86WV1 359 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 MCF2L2Q86YR7 1114 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 MB21D2Q8IYB1 491 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 TOX2Q96NM4 488 aa22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 MRPL11Q9Y3B7 192 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-209ENST00000409543 RBM47A0AV96 593 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 TRIM43BA6NCK2 446 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 B4DLN1 442 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 DYNC1LI2O43237 492 aaPredicted RBP22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 PQBP1O60828 265 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 CLTBP09497 229 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 MRPL12P52815 198 aaKnown RBP22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 ANTXR2P58335 489 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 GRM4Q14833 912 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 LRIT3Q3SXY7 679 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 TMEM67Q5HYA8 995 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 SH3RF1Q7Z6J0 888 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 IGDCC4Q8TDY8 1250 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 TRIM43Q96BQ3 446 aaPredicted RBP22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 MTMR8Q96EF0 704 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 SENP2Q9HC62 589 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 LTBP2Q14767 1821 aa22.84■■□□□ 1.25
TSPAN4-209ENST00000409543 MYH6P13533 1939 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 SOX1O00570 391 aaPredicted RBP22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 CDK7P50613 346 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 BEX3Q00994 111 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 PDE4DQ08499 809 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 TROAPQ12815 778 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 FSCN1Q16658 493 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 DUSP28Q4G0W2 176 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 TBC1D5Q92609 795 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 MTA3Q9BTC8 594 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 AMNQ9BXJ7 453 aa22.83■■□□□ 1.25
TSPAN4-209ENST00000409543 DCDC2CA8MYV0 355 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 ZBTB5O15062 677 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 KIAA0355O15063 1070 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 NECTIN1Q15223 517 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 TMEM63BQ5T3F8 832 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 SYTL5Q8TDW5 730 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 VTI1AQ96AJ9 217 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 WDR11Q9BZH6 1224 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 ANO2Q9NQ90 1003 aa22.82■■□□□ 1.24
TSPAN4-209ENST00000409543 A0A0U1RQG5 324 aaPredicted RBP22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 SLC27A2O14975 620 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 ZEB2O60315 1214 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 CABYRO75952 493 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 PTGS1P23219 599 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 FAAP100Q0VG06 881 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 CATIPQ7Z7H3 387 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 BADQ92934 168 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 RIOX1Q9H6W3 641 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 MROH7Q68CQ1 1323 aa22.81■■□□□ 1.24
TSPAN4-209ENST00000409543 ARVCFO00192 962 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 CREB3L3Q68CJ9 461 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 CXCL17Q6UXB2 119 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 NSUN6Q8TEA1 469 aaKnown RBP22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 LRCH3Q96II8 777 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 CCDC136Q96JN2 1154 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 TAAR1Q96RJ0 339 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 TMEM39AQ9NV64 488 aa22.8■■□□□ 1.24
TSPAN4-209ENST00000409543 LAMA3Q16787 3333 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 PRC1O43663 620 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 PPP1R11O60927 126 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 MCM5P33992 734 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 GHRHRQ02643 423 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 TRAF1Q13077 416 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 SLC35G1Q2M3R5 365 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 CASC1Q6TDU7 716 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 SCFD2Q8WU76 684 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 MAP3K14Q99558 947 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 LY9Q9HBG7 655 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 COL20A1Q9P218 1284 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 PCDHA1Q9Y5I3 950 aa22.79■■□□□ 1.24
TSPAN4-209ENST00000409543 OPLAHO14841 1288 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 NKRFO15226 690 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■■□□ 16.4
TSPAN4-209ENST00000409543 RAG1P15918 1043 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 ITGB8P26012 769 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 TMTC2Q8N394 836 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 SAMD3Q8N6K7 520 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 TMEM87BQ96K49 555 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 IWS1Q96ST2 819 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 RMDN3Q96TC7 470 aa22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 MAP3K20Q9NYL2 800 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-209ENST00000409543 SZT2Q5T011 3432 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms