RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 CCDC65Q8IXS2 484 aa6.46□□□□□ -1.38
HDAC9-203ENST00000406072 LRRN4CLQ8ND94 238 aa6.46□□□□□ -1.38
HDAC9-203ENST00000406072 PI4K2BQ8TCG2 481 aa6.46□□□□□ -1.38
HDAC9-203ENST00000406072 IFIH1Q9BYX4 1025 aaKnown RBP6.46□□□□□ -1.38
HDAC9-203ENST00000406072 INTS9Q9NV88 658 aaKnown RBP6.46□□□□□ -1.38
HDAC9-203ENST00000406072 RCOR1Q9UKL0 485 aa6.46□□□□□ -1.38
HDAC9-203ENST00000406072 PAIP2BQ9ULR5 123 aaKnown RBP6.46□□□□□ -1.38
HDAC9-203ENST00000406072 PA2G4Q9UQ80 394 aaKnown RBP6.46□□□□□ -1.38
HDAC9-203ENST00000406072 ZNF711Q9Y462 761 aa6.46□□□□□ -1.38
HDAC9-203ENST00000406072 TRIM75PA6NK02 468 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 H0Y3Z8 333 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CIB2O75838 187 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 SASH3O75995 380 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 MYL6BP14649 208 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 TMEM67Q5HYA8 995 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CFAP157Q5JU67 520 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 ANKRD13CQ8N6S4 541 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 GSDMBQ8TAX9 411 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PGBD1Q96JS3 809 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 KCNG1Q9UIX4 513 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 UTP11Q9Y3A2 253 aaKnown RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 GMNCA6NCL1 334 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PRC1O43663 620 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PFKFB2O60825 505 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PRPHP41219 470 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 MYSM1Q5VVJ2 828 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 UHMK1Q8TAS1 419 aaKnown RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 KCNB2Q92953 911 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 SGSM3Q96HU1 749 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 FGD4Q96M96 766 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CCT8L2Q96SF2 557 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 HOMER3Q9NSC5 361 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 AATFQ9NY61 560 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 NOVA2Q9UNW9 492 aaKnown RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 HYOU1Q9Y4L1 999 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 ZBTB43O43298 467 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 SRGAP2O75044 1071 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 HEXIM1O94992 359 aaKnown RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 RXRAP19793 462 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 FGFR2P21802 821 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CMA1P23946 247 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CXCR5P32302 372 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 STAT6P42226 847 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 MMP14P50281 582 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 IQCB1Q15051 598 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 HLFQ16534 295 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 BEND6Q5SZJ8 279 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PROM2Q8N271 834 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 STAMQ92783 540 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 CCDC85AQ96PX6 553 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 ELAC2Q9BQ52 826 aaKnown RBP6.45□□□□□ -1.38
HDAC9-203ENST00000406072 LRRC4BQ9NT99 713 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 PPP1R9AQ9ULJ8 1098 aa6.45□□□□□ -1.38
HDAC9-203ENST00000406072 TTC36A6NLP5 189 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 TMEM232C9JQI7 657 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 ACTN4O43707 911 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 HOXA10P31260 410 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 STX2P32856 288 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 VPS41P49754 854 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 NLRP5P59047 1200 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 ZBTB17Q13105 803 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 CALCOCO2Q13137 446 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 EPHA10Q5JZY3 1008 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 ACBD5Q5T8D3 534 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 CYB5D1Q6P9G0 228 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 EMBQ6PCB8 327 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 SH2D3CQ8N5H7 860 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 TTLL11Q8NHH1 800 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 TBC1D22AQ8WUA7 517 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 HOOK2Q96ED9 719 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 PYM1Q9BRP8 204 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 PAPOLBQ9NRJ5 636 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 RTCBQ9Y3I0 505 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 HMGB1P1B2RPK0 211 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 PTCD1O75127 700 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 PPP1R37O75864 691 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 FLOT1O75955 427 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 PSEN1P49768 467 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 SEC24CP53992 1094 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 KCNB1Q14721 858 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 DENND2CQ68D51 928 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 POTEAQ6S8J7 498 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 MIER3Q7Z3K6 550 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 LONP2Q86WA8 852 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 KSR1Q8IVT5 923 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 SYCP3Q8IZU3 236 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 IQUBQ8NA54 791 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 B4GALNT2Q8NHY0 566 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 DDX23Q9BUQ8 820 aaKnown RBP6.44□□□□□ -1.38
HDAC9-203ENST00000406072 HOMER2Q9NSB8 354 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 EXOC1Q9NV70 894 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 L1RE1Q9UN81 338 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 ZMYM6O95789 1325 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 EYA2O00167 538 aa6.44□□□□□ -1.38
HDAC9-203ENST00000406072 STXBP3O00186 592 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms