RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 CCDC171Q6TFL3 1326 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 NFIBO00712 420 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 ZNF543Q08ER8 600 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 RAB30Q15771 203 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 RRP12Q5JTH9 1297 aaKnown RBP22.83■■□□□ 1.25
HDAC11-205ENST00000404548 EEPD1Q7L9B9 569 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 ZNF589Q86UQ0 364 aaPredicted RBP22.83■■□□□ 1.25
HDAC11-205ENST00000404548 CRBNQ96SW2 442 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 RNF41Q9H4P4 317 aaPredicted RBP22.83■■□□□ 1.25
HDAC11-205ENST00000404548 POLR3EQ9NVU0 708 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 MTMR7Q9Y216 660 aa22.83■■□□□ 1.25
HDAC11-205ENST00000404548 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
HDAC11-205ENST00000404548 B4GALT4O60513 344 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 ACRP10323 421 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 EDNRBP24530 442 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 CPT1AP50416 773 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 MFAP1P55081 439 aaKnown RBP22.82■■□□□ 1.24
HDAC11-205ENST00000404548 AKNAD1Q5T1N1 836 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 CLEC4DQ8WXI8 215 aa22.82■■□□□ 1.24
HDAC11-205ENST00000404548 PURBQ96QR8 312 aaKnown RBP22.82■■□□□ 1.24
HDAC11-205ENST00000404548 MPHOSPH6Q99547 160 aaKnown RBP22.82■■□□□ 1.24
HDAC11-205ENST00000404548 NKRFO15226 690 aaKnown RBP eCLIP22.81■■□□□ 1.243e-7■■■■□ 24.1
HDAC11-205ENST00000404548 FGBP02675 491 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 NMIQ13287 307 aaPredicted RBP22.81■■□□□ 1.24
HDAC11-205ENST00000404548 GPATCH4Q5T3I0 446 aaKnown RBP22.81■■□□□ 1.24
HDAC11-205ENST00000404548 MFSD6Q6ZSS7 791 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 DNERQ8NFT8 737 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 SYMPKQ92797 1274 aaKnown RBP22.81■■□□□ 1.24
HDAC11-205ENST00000404548 WDR11Q9BZH6 1224 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 TRPV6Q9H1D0 765 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 ALDH8A1Q9H2A2 487 aaPredicted RBP22.81■■□□□ 1.24
HDAC11-205ENST00000404548 GPCPD1Q9NPB8 672 aa22.81■■□□□ 1.24
HDAC11-205ENST00000404548 FRMPD2Q68DX3 1309 aaPredicted RBP22.81■■□□□ 1.24
HDAC11-205ENST00000404548 PTPDC1A2A3K4 754 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 SUPT20HL2P0C7V6 817 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 PTGS1P23219 599 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 PBX2P40425 430 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 PURAQ00577 322 aaKnown RBP22.8■■□□□ 1.24
HDAC11-205ENST00000404548 TMEM63BQ5T3F8 832 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 SLC30A10Q6XR72 485 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 RNF207Q6ZRF8 634 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 RGS22Q8NE09 1264 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 WNT8AQ9H1J5 351 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 MSRAQ9UJ68 235 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 TRANK1O15050 2925 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 UMODL1Q5DID0 1318 aa22.8■■□□□ 1.24
HDAC11-205ENST00000404548 PFKMP08237 780 aa22.79■■□□□ 1.24
HDAC11-205ENST00000404548 DGKHQ86XP1 1220 aa22.79■■□□□ 1.24
HDAC11-205ENST00000404548 SMC5Q8IY18 1101 aa22.79■■□□□ 1.24
HDAC11-205ENST00000404548 RPUSD2Q8IZ73 545 aaKnown RBP22.79■■□□□ 1.24
HDAC11-205ENST00000404548 ESR2Q92731 530 aa22.79■■□□□ 1.24
HDAC11-205ENST00000404548 GAS2L1Q99501 681 aaPredicted RBP22.79■■□□□ 1.24
HDAC11-205ENST00000404548 CXXC1Q9P0U4 656 aaPredicted RBP22.79■■□□□ 1.24
HDAC11-205ENST00000404548 RAD50Q92878 1312 aa22.79■■□□□ 1.24
HDAC11-205ENST00000404548 GRXCR1A8MXD5 290 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 B4DLN1 442 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 MRPL12P52815 198 aaKnown RBP22.78■■□□□ 1.24
HDAC11-205ENST00000404548 HAND2P61296 217 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 PSMC6P62333 389 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 RPS6P62753 249 aaKnown RBP22.78■■□□□ 1.24
HDAC11-205ENST00000404548 BRDTQ58F21 947 aaPredicted RBP22.78■■□□□ 1.24
HDAC11-205ENST00000404548 TBC1D10CQ8IV04 446 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 SCFD2Q8WU76 684 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 OSBPL3Q9H4L5 887 aa22.78■■□□□ 1.24
HDAC11-205ENST00000404548 TRIM6-TRIM34B2RNG4 842 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 KPNA6O60684 536 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 CALML3P27482 149 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 PDE4DQ08499 809 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 PPP2R5BQ15173 497 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 CCDC178Q5BJE1 867 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 USP38Q8NB14 1042 aa22.77■■□□□ 1.24
HDAC11-205ENST00000404548 MTG1Q9BT17 334 aaPredicted RBP22.77■■□□□ 1.24
HDAC11-205ENST00000404548 SCN10AQ9Y5Y9 1956 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 A6NJR5 290 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 CCL23P55773 120 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 OR6J1Q8NGC5 347 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 LNPKQ9C0E8 428 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 TNKSO95271 1327 aa22.76■■□□□ 1.23
HDAC11-205ENST00000404548 SDSP20132 328 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 PTPN11Q06124 597 aaPredicted RBP22.75■■□□□ 1.23
HDAC11-205ENST00000404548 TJAP1Q5JTD0 557 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 NFRKBQ6P4R8 1299 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 OTOP2Q7RTS6 562 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 ANKS1AQ92625 1134 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 VWCEQ96DN2 955 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 GPHNQ9NQX3 736 aaPredicted RBP22.75■■□□□ 1.23
HDAC11-205ENST00000404548 XIRP2A4UGR9 3374 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 NEDD4P46934 1319 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 LAMA4Q16363 1823 aa22.75■■□□□ 1.23
HDAC11-205ENST00000404548 PITPNM1O00562 1244 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 ZNF213O14771 459 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 IQCA1Q86XH1 822 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 RILPL2Q969X0 211 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 PRDM12Q9H4Q4 367 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 SLC28A3Q9HAS3 691 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 TRMT13Q9NUP7 481 aaKnown RBP22.74■■□□□ 1.23
HDAC11-205ENST00000404548 SLC4A7Q9Y6M7 1214 aa22.74■■□□□ 1.23
HDAC11-205ENST00000404548 MYL3P08590 195 aa22.73■■□□□ 1.23
HDAC11-205ENST00000404548 RFC2P35250 354 aa22.73■■□□□ 1.23
HDAC11-205ENST00000404548 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms