RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DDX11Q96FC9 970 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 FGD4Q96M96 766 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 TINF2Q9BSI4 451 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 HTATIP2Q9BUP3 242 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 CPVLQ9H3G5 476 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 C11orf49Q9H6J7 331 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 RNF146Q9NTX7 359 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC5A4Q9NY91 659 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 CTNNA3Q9UI47 895 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 DNAH12Q6ZR08 3092 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 DNAJC25-GNG10A0A024R161 153 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 PLA2G6O60733 806 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 SNAI1O95863 264 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 CYP21A2P08686 494 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 PDHBP11177 359 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 COL6A1P12109 1028 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 OAZ1P54368 228 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 CNTN2Q02246 1040 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZNF543Q08ER8 600 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 PTGDRQ13258 359 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 GJC2Q5T442 439 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 CENPQQ7L2Z9 268 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 C7orf61Q8IZ16 206 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 ENAHQ8N8S7 591 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 PNMA1Q8ND90 353 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 CHST13Q8NET6 341 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 RUFY2Q8WXA3 655 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 TTC14Q96N46 770 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 TRERF1Q96PN7 1200 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 PURBQ96QR8 312 aaKnown RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZSCAN10Q96SZ4 725 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 MTRQ99707 1265 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 UBA5Q9GZZ9 404 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 ACAD9Q9H845 621 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 A1CFQ9NQ94 594 aaKnown RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 CCPG1Q9ULG6 757 aa6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZMYND8Q9ULU4 1186 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P20-201ENST00000402555 TNKSO95271 1327 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SEPT4O43236 478 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 MSCO60682 206 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 PGK1P00558 417 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZNF865P0CJ78 1059 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SNHG28P0DPA3 235 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 FDX1P10109 184 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SYN1P17600 705 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 CAPN2P17655 700 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 PLCB2Q00722 1185 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 LRRC26Q2I0M4 334 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SWT1Q5T5J6 900 aaKnown RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 BTNL9Q6UXG8 535 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 NSMFQ6X4W1 530 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 STOX1Q6ZVD7 989 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 CHST3Q7LGC8 479 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 IQCA1Q86XH1 822 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 UBAC1Q9BSL1 405 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 KRT23Q9C075 422 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SENP6Q9GZR1 1112 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 RANBP17Q9H2T7 1088 aaKnown RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 KAT14Q9H8E8 782 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 SENP2Q9HC62 589 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 FBXO40Q9UH90 709 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZHX1Q9UKY1 873 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 DIS3Q9Y2L1 958 aaKnown RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 RBM8AQ9Y5S9 174 aaKnown RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 NR2E3Q9Y5X4 410 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 BAZ2BQ9UIF8 2168 aaKnown RBP6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 LCTP09848 1927 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 ASTN1O14525 1302 aa6.76□□□□□ -1.33
HMGB1P20-201ENST00000402555 E7EWF7 191 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 NFIBO00712 420 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ADCY6O43306 1168 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ICAM1P05362 532 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 PTGS1P23219 599 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ANTXR2P58335 489 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 LRRC41Q15345 812 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 SEC23AQ15436 765 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 TKFCQ3LXA3 575 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 USH1GQ495M9 461 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CCDC178Q5BJE1 867 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 HABP4Q5JVS0 413 aaKnown RBP6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 IFIT1BQ5T764 474 aaKnown RBP6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ARMCX2Q7L311 632 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CCDC144CPQ8IYA2 1237 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 FAM133AQ8N9E0 248 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ANKS1AQ92625 1134 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 MAP4K1Q92918 833 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 FERMT2Q96AC1 680 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 ESYT1Q9BSJ8 1104 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CNNM2Q9H8M5 875 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 XPNPEP3Q9NQH7 507 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CYP39A1Q9NYL5 469 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 CNPY2Q9Y2B0 182 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms