RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 MAPK4P31152 587 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 FAM110CQ1W6H9 321 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 SLC35G1Q2M3R5 365 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 PPP1R18Q6NYC8 613 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 PDCD7Q8N8D1 485 aaKnown RBP10.25□□□□□ -0.77
BRCC3-206ENST00000399042 CHST13Q8NET6 341 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 AIFM3Q96NN9 605 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 MMP19Q99542 508 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 MOV10L1Q9BXT6 1211 aaKnown RBP10.25□□□□□ -0.77
BRCC3-206ENST00000399042 MROH8Q9H579 483 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 SH3GLB2Q9NR46 395 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 ADAMTS5Q9UNA0 930 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 KCNJ14Q9UNX9 436 aa10.25□□□□□ -0.77
BRCC3-206ENST00000399042 SPDYE3A6NKU9 549 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 TNPO2O14787 897 aaKnown RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 ATP2A1O14983 1001 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 FCER1AP12319 257 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 FDPSP14324 419 aaKnown RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 KRT2P35908 639 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 PKN1Q16512 942 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 Q3C1V9 767 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 FOXD4L5Q5VV16 416 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 KRT40Q6A162 431 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 RNF207Q6ZRF8 634 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 FCHSD1Q86WN1 690 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 EHMT1Q9H9B1 1298 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
BRCC3-206ENST00000399042 ZNF214Q9UL59 606 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-206ENST00000399042 CCDC194A0A1B0GVG4 234 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 STX6O43752 255 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 CNMDO75829 334 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 PDIA4P13667 645 aaKnown RBP10.23□□□□□ -0.77
BRCC3-206ENST00000399042 HOXA13P31271 388 aaPredicted RBP10.23□□□□□ -0.77
BRCC3-206ENST00000399042 FCGRTP55899 365 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 SP3Q02447 781 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 C17orf99Q6UX52 265 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 PLEKHH3Q7Z736 793 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 DPP9Q86TI2 863 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 REXO1Q8N1G1 1221 aaKnown RBP10.23□□□□□ -0.77
BRCC3-206ENST00000399042 SHCBP1Q8NEM2 672 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 REPS2Q8NFH8 660 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 MPHOSPH6Q99547 160 aaKnown RBP10.23□□□□□ -0.77
BRCC3-206ENST00000399042 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 RIC8AQ9NPQ8 531 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 SAGE1Q9NXZ1 904 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 SLC5A4Q9NY91 659 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 MORF4L1Q9UBU8 362 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
BRCC3-206ENST00000399042 TSKSQ9UJT2 592 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 RIPK3Q9Y572 518 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 ZNF536O15090 1300 aa10.23□□□□□ -0.77
BRCC3-206ENST00000399042 PHIPQ8WWQ0 1821 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 B4DLN1 442 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 NFIBO00712 420 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 STRNO43815 780 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 FKTNO75072 461 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 BCRP11274 1271 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 SYT1P21579 422 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 HOXD10P28358 340 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 PSMC4P43686 418 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 BAATQ14032 418 aaPredicted RBP10.22□□□□□ -0.77
BRCC3-206ENST00000399042 UBE2SQ16763 222 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 DIS3L2Q8IYB7 885 aaKnown RBP10.22□□□□□ -0.77
BRCC3-206ENST00000399042 BLIDQ8IZY5 108 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 FAM177A1Q8N128 213 aaPredicted RBP10.22□□□□□ -0.77
BRCC3-206ENST00000399042 FBXO18Q8NFZ0 1043 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 PORCNQ9H237 461 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 R3HDMLQ9H3Y0 253 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 GJB4Q9NTQ9 266 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 PFASO15067 1338 aa10.22□□□□□ -0.77
BRCC3-206ENST00000399042 GPR25O00155 361 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.77
BRCC3-206ENST00000399042 MMP1P03956 469 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ATP2B1P20020 1258 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ZNF76P36508 570 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 NUCB2P80303 420 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ARHGEF16Q5VV41 709 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 LHX8Q68G74 356 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 MCTP2Q6DN12 878 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 GPR142Q7Z601 462 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 FERMT3Q86UX7 667 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ERO1AQ96HE7 468 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 PHF20Q9BVI0 1012 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ZMYND12Q9H0C1 365 aa10.21□□□□□ -0.77
BRCC3-206ENST00000399042 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
BRCC3-206ENST00000399042 NOL7Q9UMY1 257 aaKnown RBP10.21□□□□□ -0.77
BRCC3-206ENST00000399042 BAZ2BQ9UIF8 2168 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms