RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 BMP3P12645 472 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 INHBEP58166 350 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 NLRP12P59046 1061 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 SREBF2Q12772 1141 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 CATSPERGQ6ZRH7 1159 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 ANKRD23Q86SG2 305 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 RRP36Q96EU6 259 aaKnown RBP20.84■□□□□ 0.93
MBD1-208ENST00000398493 CPVLQ9H3G5 476 aa20.84■□□□□ 0.93
MBD1-208ENST00000398493 SEC63Q9UGP8 760 aaKnown RBP20.84■□□□□ 0.93
MBD1-208ENST00000398493 CYP2C8P10632 490 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 HOXA7P31268 230 aaPredicted RBP20.83■□□□□ 0.93
MBD1-208ENST00000398493 IQCB1Q15051 598 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 C11orf57Q6ZUT1 292 aaPredicted RBP20.83■□□□□ 0.93
MBD1-208ENST00000398493 DCAF4Q8WV16 495 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 GPCPD1Q9NPB8 672 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 BARHL2Q9NY43 387 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 ZKSCAN5Q9Y2L8 839 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 LOC285556D6RIA3 1793 aa20.83■□□□□ 0.93
MBD1-208ENST00000398493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.83■□□□□ 0.92
MBD1-208ENST00000398493 TMEM232C9JQI7 657 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 ZNF543Q08ER8 600 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 PIK3AP1Q6ZUJ8 805 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 HEATR3Q7Z4Q2 680 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 DAGLBQ8NCG7 672 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 TANGO6Q9C0B7 1094 aa20.83■□□□□ 0.92
MBD1-208ENST00000398493 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.92
MBD1-208ENST00000398493 USP17L15C9J2P7 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L13C9JLJ4 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L11C9JVI0 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L18D6R9N7 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L22D6RA61 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L17D6RBQ6 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L19D6RCP7 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L20D6RJB6 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 SLC16A2P36021 539 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 USP17L24Q0WX57 530 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 ZNF174Q15697 407 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 CCDC96Q2M329 555 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 ASPRV1Q53RT3 343 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 EARS2Q5JPH6 523 aaKnown RBP20.82■□□□□ 0.92
MBD1-208ENST00000398493 GPKOWQ92917 476 aaPredicted RBP eCLIP20.82■□□□□ 0.92
MBD1-208ENST00000398493 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
MBD1-208ENST00000398493 BPIFA3Q9BQP9 254 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 TRIM5Q9C035 493 aa20.82■□□□□ 0.92
MBD1-208ENST00000398493 ASCC2Q9H1I8 757 aaPredicted RBP20.82■□□□□ 0.92
MBD1-208ENST00000398493 CCDC194A0A1B0GVG4 234 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 FAM205CA6NFA0 338 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 CYTH3O43739 400 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 TPM4P67936 248 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 SLC35G1Q2M3R5 365 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 LONRF3Q496Y0 759 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 ERCC4Q92889 916 aaPredicted RBP20.81■□□□□ 0.92
MBD1-208ENST00000398493 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 TUBE1Q9UJT0 475 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 hCG_1984214I3L0E3 225 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 PEX10O60683 326 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 FLOT1O75955 427 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 WWC2Q6AWC2 1192 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
MBD1-208ENST00000398493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.81■□□□□ 0.92
MBD1-208ENST00000398493 ZNF713Q8N859 430 aaPredicted RBP20.81■□□□□ 0.92
MBD1-208ENST00000398493 CSRNP2Q9H175 543 aa20.81■□□□□ 0.92
MBD1-208ENST00000398493 SMTNL1A8MU46 457 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 STXBP3O00186 592 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 AP5Z1O43299 807 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 GNA11P29992 359 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 PYM1Q9BRP8 204 aaKnown RBP20.8■□□□□ 0.92
MBD1-208ENST00000398493 R3HDMLQ9H3Y0 253 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 C6orf50Q9HD87 102 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 SLC45A1Q9Y2W3 748 aa20.8■□□□□ 0.92
MBD1-208ENST00000398493 POLR2DO15514 142 aaKnown RBP20.79■□□□□ 0.92
MBD1-208ENST00000398493 ATP2C1P98194 919 aaPredicted RBP20.79■□□□□ 0.92
MBD1-208ENST00000398493 PTGDRQ13258 359 aa20.79■□□□□ 0.92
MBD1-208ENST00000398493 THSD7BQ9C0I4 1608 aa20.79■□□□□ 0.92
MBD1-208ENST00000398493 SPDYE16A6NNV3 312 aaPredicted RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 NAPAP54920 295 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 COG2Q14746 738 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 SARM1Q6SZW1 724 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 REM2Q8IYK8 340 aaPredicted RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 KIFC2Q96AC6 838 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 ATG4CQ96DT6 458 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 RIOX1Q9H6W3 641 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 OSBPP22059 807 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 DSG3P32926 999 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 ZNF75DP51815 510 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 STAT2P52630 851 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 SNAP25P60880 206 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 IRX3P78415 501 aaPredicted RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 GRIN1Q05586 938 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.92
MBD1-208ENST00000398493 TAF1CQ15572 869 aaPredicted RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 GPATCH4Q5T3I0 446 aaKnown RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 ARL6IP4Q66PJ3 421 aaKnown RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
MBD1-208ENST00000398493 DRC7Q8IY82 874 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 ZMYND12Q9H0C1 365 aa20.78■□□□□ 0.92
MBD1-208ENST00000398493 VAT1LQ9HCJ6 419 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms